RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 HDAC7Q8WUI4 952 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 ATRIPQ8WXE1 791 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 FUCA2Q9BTY2 467 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 BCO2Q9BYV7 579 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 SLC39A2Q9NP94 309 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 LTB4R2Q9NPC1 389 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 TBC1D7Q9P0N9 293 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 FNIP2Q9P278 1114 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 USP20Q9Y2K6 914 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 GDAQ9Y2T3 454 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 VWA8A3KMH1 1905 aa18.1■□□□□ 0.49
CDC42EP1-202ENST00000415670 LILRB5O75023 590 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 NPTXRO95502 500 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 ARF4P18085 180 aaPredicted RBP18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 SMTNP53814 917 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 STK4Q13043 487 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 TFDP1Q14186 410 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 RSPO2Q6UXX9 243 aaPredicted RBP18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 CEP57Q86XR8 500 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 NELL1Q92832 810 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 KCNN1Q92952 543 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 ST6GALNAC4Q9H4F1 302 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 KMT5AQ9NQR1 393 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 DNMT3BQ9UBC3 853 aaKnown RBP18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 STK39Q9UEW8 545 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 FBXW11Q9UKB1 542 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 ADAM28Q9UKQ2 775 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 FBXO4Q9UKT5 387 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 USP18Q9UMW8 372 aa18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.09■□□□□ 0.49
CDC42EP1-202ENST00000415670 USP24Q9UPU5 2620 aa18.08■□□□□ 0.49
CDC42EP1-202ENST00000415670 CASTOR2A6NHX0 329 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 LRRIQ4A6NIV6 560 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 TTLL13PA6NNM8 815 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 CCDC169A6NNP5 214 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 H0YCG3 227 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 SLC16A4O15374 487 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 TADA2AO75478 443 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 PPP1R37O75864 691 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 CCDC192P0DO97 292 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 SCP2P22307 547 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 NMT1P30419 496 aaKnown RBP18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 ZNF445P59923 1031 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 POU5F1BQ06416 359 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 TYRO3Q06418 890 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 SPEM2Q0P670 501 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 MTAPQ13126 283 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 ALCAMQ13740 583 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 COBLL1Q53SF7 1204 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 TPRG1Q6ZUI0 275 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 EPM2AIP1Q7L775 607 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 ZNF720Q7Z2F6 126 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 DEPTORQ8TB45 409 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 LNX1Q8TBB1 728 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 MCRS1Q96EZ8 462 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 SHDQ96IW2 340 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 STRA6Q9BX79 667 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 FGFBP2Q9BYJ0 223 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 HEBP1Q9NRV9 189 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 ANO10Q9NW15 660 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 ZSCAN32Q9NX65 697 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 ARHGAP28Q9P2N2 729 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 DPP7Q9UHL4 492 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 CHD6Q8TD26 2715 aa18.08■□□□□ 0.48
CDC42EP1-202ENST00000415670 INO80B-WBP1J3KQ70 363 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 K7ENM7 598 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 EIF3DO15371 548 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 ERLIN2O94905 339 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 GCNT3O95395 438 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 C8AP07357 584 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 CASP5P51878 434 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 PTENP60484 403 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 MBTD1Q05BQ5 628 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 STX1AQ16623 288 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 SLC5A9Q2M3M2 681 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 DPCR1Q3MIW9 517 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 PPM1LQ5SGD2 360 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 CDCA2Q69YH5 1023 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 STXBP4Q6ZWJ1 553 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 HAUS6Q7Z4H7 955 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 IFNLR1Q8IU57 520 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 MLKLQ8NB16 471 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 TMEM161BQ8NDZ6 487 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 GLIS3Q8NEA6 775 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 CLDN23Q96B33 292 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 KIFC3Q9BVG8 833 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 NFKBIZQ9BYH8 718 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 EPC1Q9H2F5 836 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 UBN1Q9NPG3 1134 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 PARP2Q9UGN5 583 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 CDV3Q9UKY7 258 aaKnown RBP18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 PCDHGA2Q9Y5H1 932 aa18.07■□□□□ 0.48
CDC42EP1-202ENST00000415670 UBE4BO95155 1302 aa18.06■□□□□ 0.48
CDC42EP1-202ENST00000415670 KIF4AO95239 1232 aa18.06■□□□□ 0.48
CDC42EP1-202ENST00000415670 ABCD1P33897 745 aa18.06■□□□□ 0.48
CDC42EP1-202ENST00000415670 PPP1R2P41236 205 aa18.06■□□□□ 0.48
CDC42EP1-202ENST00000415670 PRCPP42785 496 aa18.06■□□□□ 0.48
CDC42EP1-202ENST00000415670 EFNA5P52803 228 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms