RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 SIX4Q9UIU6 781 aa15.42■□□□□ 0.06
SAPCD1-208ENST00000415669 IRAK3Q9Y616 596 aa15.42■□□□□ 0.06
SAPCD1-208ENST00000415669 COL6A3P12111 3177 aa15.42■□□□□ 0.06
SAPCD1-208ENST00000415669 SYN3O14994 580 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 SPTLC1O15269 473 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 CNPP09543 421 aaKnown RBP15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 ODC1P11926 461 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 AP3M2P53677 418 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 CLDN10P78369 228 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 CREMQ03060 361 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 TRPC3Q13507 836 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 TPD52L1Q16890 204 aaPredicted RBP15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 VARS2Q5ST30 1063 aaKnown RBP15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 TCERG1LQ5VWI1 586 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 TDRD10Q5VZ19 366 aaKnown RBP15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 SCARA3Q6AZY7 606 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 PDXDC1Q6P996 788 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 EP400NLQ6ZTU2 488 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 GLYCTKQ8IVS8 523 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 CXorf38Q8TB03 319 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 PIK3R5Q8WYR1 880 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 ARMCX3Q9UH62 379 aaPredicted RBP15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 PCDHB8Q9UN66 801 aa15.41■□□□□ 0.06
SAPCD1-208ENST00000415669 KPNA7A9QM74 516 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 M0QZQ0 153 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 LILRB3O75022 631 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 FGFR1OPO95684 399 aaKnown RBP15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 ADH1AP07327 375 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 RPL17P18621 184 aaKnown RBP15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 PAX3P23760 479 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 PIK3CAP42336 1068 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 ENPEPQ07075 957 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 MYO1EQ12965 1108 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 C1orf220Q5T0J3 134 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 LLGL2Q6P1M3 1020 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 ANKS3Q6ZW76 656 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 APPL2Q8NEU8 664 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 LNX1Q8TBB1 728 aaPredicted RBP15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 HPDLQ96IR7 371 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 SENP8Q96LD8 212 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 KLHL5Q96PQ7 755 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 CDCA3Q99618 268 aaPredicted RBP15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 SRRTQ9BXP5 876 aaKnown RBP15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 ANO10Q9NW15 660 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 CLDND1Q9NY35 253 aa15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 TIMM13Q9Y5L4 95 aaPredicted RBP15.4■□□□□ 0.06
SAPCD1-208ENST00000415669 ARHGEF37A1IGU5 675 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 FSD2A1L4K1 749 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 CYB561D2O14569 222 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 IKBKBO14920 756 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 TEX28O15482 410 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 LINC01565O15544 149 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 CLASP2O75122 1294 aaKnown RBP15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 C4BPAP04003 597 aaKnown RBP15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 KLRC2P26717 231 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 ERCC5P28715 1186 aaPredicted RBP15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 GCLMP48507 274 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 NDUFV1P49821 464 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 YWHAHQ04917 246 aaPredicted RBP15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 PPP3CAQ08209 521 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 NCOA4Q13772 614 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 SKOR2Q2VWA4 1001 aaPredicted RBP15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 ZACNQ401N2 412 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 ZNF280DQ6N043 979 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 FILIP1Q7Z7B0 1213 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 GPR65Q8IYL9 337 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 MED15Q96RN5 788 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 RXFP1Q9HBX9 757 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 METTL14Q9HCE5 456 aaKnown RBP15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 MTRRQ9UBK8 725 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 SNX9Q9Y5X1 595 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 PRUNE2Q8WUY3 3088 aa15.39■□□□□ 0.05
SAPCD1-208ENST00000415669 H7C4K7 107 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 STX10O60499 249 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 GNA14O95837 355 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 CST3P01034 146 aaPredicted RBP15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 SRGAP2BP0DMP2 458 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 CCDC192P0DO97 292 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 MXI1P50539 228 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 MYL6P60660 151 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 RBM10P98175 930 aaKnown RBP15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 TYRO3Q06418 890 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 NFKBIBQ15653 356 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 ZNF699Q32M78 642 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 CTXN3Q4LDR2 81 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 C11orf57Q6ZUT1 292 aaPredicted RBP15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 SV2AQ7L0J3 742 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 FRMD5Q7Z6J6 570 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 PPFIBP1Q86W92 1011 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 CREBRFQ8IUR6 639 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 EFHBQ8N7U6 833 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 PABPC5Q96DU9 382 aaKnown RBP15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 CNOT6LQ96LI5 555 aaKnown RBP15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 TMEM8AQ9HCN3 771 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 FNIP2Q9P278 1114 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 DSEQ9UL01 958 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 HCFC2Q9Y5Z7 792 aa15.38■□□□□ 0.05
SAPCD1-208ENST00000415669 CDY1Q9Y6F8 540 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms