RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 SPDYE2Q495Y8 402 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 MAP3K21Q5TCX8 1036 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 CCDC62Q6P9F0 684 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 PEX5LQ8IYB4 626 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 NUP93Q8N1F7 819 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 SERPINB12Q96P63 405 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 HNRNPABQ99729 332 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 ECSITQ9BQ95 431 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 ERP44Q9BS26 406 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 HSFX1Q9UBD0 423 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 LNPEPQ9UIQ6 1025 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 SALL4Q9UJQ4 1053 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 TRAF3IP3Q9Y228 551 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 FGRP09769 529 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 FCER1AP12319 257 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 KRT13P13646 458 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 PHBP35232 272 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 AP3B2Q13367 1082 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 DHX34Q14147 1143 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 GIT2Q14161 759 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 ACAD11Q709F0 780 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 APOBEC3FQ8IUX4 373 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 NLGN2Q8NFZ4 835 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 UHMK1Q8TAS1 419 aaKnown RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 FNDC8Q8TC99 324 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 SEC14L1Q92503 715 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 SYN2Q92777 582 aaPredicted RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 ITPKCQ96DU7 683 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 RGS17Q9UGC6 210 aaPredicted RBP8.27□□□□□ -1.09
SIK3-203ENST00000415541 FRMD4BQ9Y2L6 1034 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 IVNS1ABPQ9Y6Y0 642 aa8.27□□□□□ -1.09
SIK3-203ENST00000415541 RBAK-RBAKDNI3L0D1 243 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 NOP56O00567 594 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 DDX3XO00571 662 aaKnown RBP eCLIP8.26□□□□□ -1.09
SIK3-203ENST00000415541 KDM1AO60341 852 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 DKC1O60832 514 aaKnown RBP eCLIP8.26□□□□□ -1.09
SIK3-203ENST00000415541 CETN1Q12798 172 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 AUHQ13825 339 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 MAN2A1Q16706 1144 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 WDR72Q3MJ13 1102 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 ZC2HC1CQ53FD0 456 aaPredicted RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 ODR4Q5SWX8 454 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 ZNF280DQ6N043 979 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 VPS36Q86VN1 386 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 FAM178BQ8IXR5 827 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 PRPF31Q8WWY3 499 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 GLG1Q92896 1179 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 SH3GL1Q99961 368 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 FHDC1Q9C0D6 1143 aaPredicted RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 STK17AQ9UEE5 414 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 EFR3BQ9Y2G0 817 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 TAF1P21675 1872 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 CLIC2O15247 247 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 EXOC3O60645 756 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 BAG2O95816 211 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 CYP1A1P04798 512 aaPredicted RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 LMNB1P20700 586 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 NFKBIAP25963 317 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 VARSP26640 1264 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 RPL5P46777 297 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 PPIDQ08752 370 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 FAM102BQ5T8I3 360 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 TTI2Q6NXR4 508 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 ALDH16A1Q8IZ83 802 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 EPS8L3Q8TE67 593 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 BTBD10Q9BSF8 475 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 ELP3Q9H9T3 547 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 PODXLO00592 558 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 LDHAP00338 332 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 IREB2P48200 963 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 DRG2P55039 364 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 PSMC1P62191 440 aaKnown RBP8.26□□□□□ -1.09
SIK3-203ENST00000415541 KLHL30Q0D2K2 578 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 SLC18A3Q16572 532 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 KIAA1755Q5JYT7 1200 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 SAPCD2Q86UD0 394 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 RASSF3Q86WH2 238 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 ZBED8Q8IZ13 594 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 ATG4CQ96DT6 458 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 Q9H521 79 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 TLE6Q9H808 572 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 CARD8Q9Y2G2 431 aa8.26□□□□□ -1.09
SIK3-203ENST00000415541 LRP5O75197 1615 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 ABCA3Q99758 1704 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 BHMG1C9JSJ3 638 aaPredicted RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 TBX10O75333 385 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 GAS8O95995 478 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 EIF2S1P05198 315 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 ZBTB16Q05516 673 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 GABPAQ06546 454 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 DGKZQ13574 1117 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 PDXDC2PQ6P474 469 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 TRMT10CQ7L0Y3 403 aaKnown RBP8.25□□□□□ -1.09
SIK3-203ENST00000415541 OTUD6AQ7L8S5 288 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 CYP4X1Q8N118 509 aa8.25□□□□□ -1.09
SIK3-203ENST00000415541 ZNF280CQ8ND82 737 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms