RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 RIN2Q8WYP3 895 aaPredicted RBP15.84■□□□□ 0.13
USP4-203ENST00000415188 DHX38Q92620 1227 aaKnown RBP15.84■□□□□ 0.13
USP4-203ENST00000415188 EMID1Q96A84 441 aaPredicted RBP15.84■□□□□ 0.13
USP4-203ENST00000415188 RAB17Q9H0T7 212 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 NKX2-4Q9H2Z4 354 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 SCN5AQ14524 2016 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 PRUNE2Q8WUY3 3088 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 TMEM150BA6NC51 233 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 ZNF862O60290 1169 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 IQCF3P0C7M6 154 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 UBA1P22314 1058 aaKnown RBP15.84■□□□□ 0.13
USP4-203ENST00000415188 PSEN2P49810 448 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 PTENP60484 403 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 DHX34Q14147 1143 aaKnown RBP15.84■□□□□ 0.13
USP4-203ENST00000415188 XKR3Q5GH77 459 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 EMC10Q5UCC4 262 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 ABHD15Q6UXT9 468 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 DNAAF5Q86Y56 855 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 KREMEN1Q96MU8 473 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 RUNDC3BQ96NL0 473 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 TAS2R14Q9NYV8 317 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 CTTNBP2NLQ9P2B4 639 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 ARHGAP28Q9P2N2 729 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 UVRAGQ9P2Y5 699 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 MSRAQ9UJ68 235 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 GTF3C4Q9UKN8 822 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 SLC4A7Q9Y6M7 1214 aa15.84■□□□□ 0.13
USP4-203ENST00000415188 CHD9Q3L8U1 2897 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 ESYT3A0FGR9 886 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 ZSCAN5CA6NGD5 496 aaPredicted RBP15.83■□□□□ 0.12
USP4-203ENST00000415188 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 FGGP02679 453 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 CYP1A2P05177 515 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 FAM153BP0C7A2 387 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 MYOGP15173 224 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 CHRNB2P17787 502 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 GBP1P32455 592 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 PDE6CP51160 858 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 ACTR2P61160 394 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 PRKCEQ02156 737 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 GCNT1Q02742 428 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 HLTFQ14527 1009 aaKnown RBP eCLIP15.83■□□□□ 0.12
USP4-203ENST00000415188 RAB30Q15771 203 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 HSDL1Q3SXM5 330 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 FAM153CQ494X1 144 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 CELF3Q5SZQ8 465 aaKnown RBP15.83■□□□□ 0.12
USP4-203ENST00000415188 SMYD5Q6GMV2 418 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 SESTD1Q86VW0 696 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 PPM1KQ8N3J5 372 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 HELQQ8TDG4 1101 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 BSNDQ8WZ55 320 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 POMGNT1Q8WZA1 660 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 SPATA33Q96N06 139 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 HINFPQ9BQA5 517 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 AP1M1Q9BXS5 423 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 DDX47Q9H0S4 455 aaKnown RBP15.83■□□□□ 0.12
USP4-203ENST00000415188 CYP26B1Q9NR63 512 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 RAB20Q9NX57 234 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 FAM153AQ9UHL3 310 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 COG5Q9UP83 839 aa15.83■□□□□ 0.12
USP4-203ENST00000415188 UTP11Q9Y3A2 253 aaKnown RBP15.83■□□□□ 0.12
USP4-203ENST00000415188 DOCK5Q9H7D0 1870 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 GOLGA8IPA6NC78 632 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 GOLGA8JA6NMD2 632 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 HMGB1P1B2RPK0 211 aaPredicted RBP15.82■□□□□ 0.12
USP4-203ENST00000415188 F2P00734 622 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 PFKMP08237 780 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 CTNNA2P26232 953 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 ECHS1P30084 290 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 CDR2Q01850 454 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 POU5F1Q01860 360 aaKnown RBP15.82■□□□□ 0.12
USP4-203ENST00000415188 BFSP2Q13515 415 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 MFSD10Q14728 455 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 SWSAP1Q6NVH7 229 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 SLC39A4Q6P5W5 647 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 NOP9Q86U38 636 aaKnown RBP15.82■□□□□ 0.12
USP4-203ENST00000415188 ZNF677Q86XU0 584 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 PALB2Q86YC2 1186 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 C7orf31Q8N865 590 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 SEMA4DQ92854 862 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 SAAL1Q96ER3 474 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 POLR3FQ9H1D9 316 aaPredicted RBP15.82■□□□□ 0.12
USP4-203ENST00000415188 PRDM12Q9H4Q4 367 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 XPNPEP1Q9NQW7 623 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 SEPT9Q9UHD8 586 aaPredicted RBP15.82■□□□□ 0.12
USP4-203ENST00000415188 GTF2IRD1Q9UHL9 959 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 RASAL2Q9UJF2 1139 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 ALG6Q9Y672 507 aa15.82■□□□□ 0.12
USP4-203ENST00000415188 GBF1Q92538 1859 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 ZNF233A6NK53 670 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 HAS3O00219 553 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 EXTL3O43909 919 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 PPFIA4O75335 1185 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 ATG7O95352 703 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 PIGRP01833 764 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 HOXD8P13378 290 aaPredicted RBP15.81■□□□□ 0.12
USP4-203ENST00000415188 CYP11B1P15538 503 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 ATP2A2P16615 1042 aaKnown RBP15.81■□□□□ 0.12
USP4-203ENST00000415188 RFC2P35250 354 aa15.81■□□□□ 0.12
USP4-203ENST00000415188 USP8P40818 1118 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms