RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ACBD5Q5T8D3 534 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 SNRNP48Q6IEG0 339 aaKnown RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 IQCEQ6IPM2 695 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 CEP128Q6ZU80 1094 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 PASD1Q8IV76 773 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 HERC6Q8IVU3 1022 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 CPXCR1Q8N123 301 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 ANKRD35Q8N283 1001 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 UBR7Q8N806 425 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 BTN2A2Q8WVV5 523 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 USP7Q93009 1102 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 SCYL1Q96KG9 808 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 UPF3BQ9BZI7 483 aaKnown RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 UPF3AQ9H1J1 476 aaKnown RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 ABHD16BQ9H3Z7 469 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 SH2D4AQ9H788 454 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 TCFL5Q9UL49 500 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 APOBEC2Q9Y235 224 aaKnown RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 FAM50BQ9Y247 325 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 TNPO3Q9Y5L0 923 aaKnown RBP5.37□□□□□ -1.55
PTPRK-210ENST00000415055 NCOR2Q9Y618 2525 aa5.37□□□□□ -1.55
PTPRK-210ENST00000415055 CEP250Q9BV73 2442 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 CHD8Q9HCK8 2581 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TCRBV16S1A1N1A0A5B0 115 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TMEM82A0PJX8 343 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 LCHNA4D1U4 455 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 VWA5AO00534 786 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TSPAN6O43657 245 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 LPXNO60711 386 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 EIF3JO75822 258 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 GSNP06396 782 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 PFKMP08237 780 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 SNRPB2P08579 225 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 PNLIPP16233 465 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 BPIP17213 487 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 NOP2P46087 812 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 NEK2P51955 445 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 OCRLQ01968 901 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 MCL1Q07820 350 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 CCDC184Q52MB2 194 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 FAM83BQ5T0W9 1011 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 E4F1Q66K89 784 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TMEM179Q6ZVK1 233 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 ARMCX2Q7L311 632 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TMCO2Q7Z6W1 182 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 DDX53Q86TM3 631 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TLK2Q86UE8 772 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 CERS3Q8IU89 383 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 SUGP1Q8IWZ8 645 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 MSL3Q8N5Y2 521 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 MAGEB6Q8N7X4 407 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 PRSS33Q8NF86 280 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 PHOSPHO2Q8TCD6 241 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 PANK1Q8TE04 598 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 CHMP4CQ96CF2 233 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 FAM126AQ9BYI3 521 aaPredicted RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 ASPSCR1Q9BZE9 553 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 VCPKMTQ9H867 229 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 PIH1D3Q9NQM4 214 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 TRMT13Q9NUP7 481 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 MCM9Q9NXL9 1143 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 ISY1Q9ULR0 285 aaKnown RBP5.36□□□□□ -1.55
PTPRK-210ENST00000415055 KMT2EQ8IZD2 1858 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 MYH7BA7E2Y1 1941 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 BAHCC1Q9P281 2608 aa5.36□□□□□ -1.55
PTPRK-210ENST00000415055 MAP1BP46821 2468 aaKnown RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 GRIN2DO15399 1336 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 TNKSO95271 1327 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 TRBV23OR9-2A0A075B6M9 112 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 GOLGA6CA6NDK9 693 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 GOLGA6BA6NDN3 693 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 K7ESF4 209 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 STXBP3O00186 592 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 N4BP3O15049 544 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 TPD52L2O43399 206 aaKnown RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 CD3EP07766 207 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 MYL3P08590 195 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 SUPT20HL2P0C7V6 817 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 JMJD7P0C870 316 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 GOLGA6DP0CG33 693 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 PTGS1P23219 599 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 VIPR1P32241 457 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 AFF3P51826 1226 aaKnown RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 EPHB3P54753 998 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 STRN3Q13033 797 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 STAT4Q14765 748 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 SART3Q15020 963 aaKnown RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 CLUL1Q15846 466 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 CDCA2Q69YH5 1023 aaPredicted RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 CWF19L1Q69YN2 538 aaKnown RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 ZCCHC8Q6NZY4 707 aaKnown RBP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 PKN3Q6P5Z2 889 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 MAMDC4Q6UXC1 1216 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 STRA8Q7Z7C7 330 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRK-210ENST00000415055 SSH1Q8WYL5 1049 aa5.35□□□□□ -1.55
PTPRK-210ENST00000415055 ATOH1Q92858 354 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms