RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 AGXT2Q9BYV1 514 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 DUSP15Q9H1R2 295 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 VPS11Q9H270 941 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MMADHCQ9H3L0 296 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SERHL2Q9H4I8 314 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 PDE11AQ9HCR9 933 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 TM9SF3Q9HD45 589 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 UBN1Q9NPG3 1134 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 DDX4Q9NQI0 724 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 FKBP14Q9NWM8 211 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MTRF1LQ9UGC7 380 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ADAM30Q9UKF2 790 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 ZBTB21Q9ULJ3 1066 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 CLEC4AQ9UMR7 237 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.93□□□□□ -1.78
SF3B1-203ENST00000414174 FLT1P17948 1338 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 TTC21BQ7Z4L5 1316 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 MYO3BQ8WXR4 1341 aa3.93□□□□□ -1.78
SF3B1-203ENST00000414174 TRAV6A0A075B6T7 132 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CTAGE9A4FU28 777 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 LRRC14BA6NHZ5 514 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 TRIM75PA6NK02 468 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RSPH10B2B2RC85 870 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 POLR2DO15514 142 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SUV39H1O43463 412 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 B4GALT4O60513 344 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RANBP6O60518 1105 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 TRIM13O60858 407 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SERPINC1P01008 464 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ASGR2P07307 311 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 TPM1P09493 284 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RSPH10BP0C881 870 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 PF4V1P10720 104 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 HSPA8P11142 646 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 MYCLP12524 364 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RHCEP18577 417 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CYP2C19P33261 490 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ETV3P41162 512 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 GPC3P51654 580 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 USP14P54578 494 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 DRG2P55039 364 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 PLTPP55058 493 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 DLG4P78352 724 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RHDQ02161 417 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 BTKQ06187 659 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 IDI1Q13907 227 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 PRKG1Q13976 671 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 KCNB1Q14721 858 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 GAB4Q2WGN9 574 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 PM20D1Q6GTS8 502 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RPUSD3Q6P087 351 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 B3GNT6Q6ZMB0 384 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF600Q6ZNG1 722 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 FAM47EQ6ZV65 393 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SPATC1Q76KD6 591 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RAB11FIP2Q7L804 512 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 THAP5Q7Z6K1 395 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 DNAJB7Q7Z6W7 309 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CEP57Q86XR8 500 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 GRAMD2AQ8IUY3 354 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 UNC45BQ8IWX7 931 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SYTL1Q8IYJ3 562 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC170Q8IYT3 715 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 NUP93Q8N1F7 819 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC33Q8N5R6 958 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CNTD1Q8N815 330 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 XXYLT1Q8NBI6 393 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ZBTB44Q8NCP5 570 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 TOR1AIP2Q8NFQ8 470 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 TTLL11Q8NHH1 800 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CCDC110Q8TBZ0 833 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 IFI44Q8TCB0 444 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RNF139Q8WU17 664 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 CPLX3Q8WVH0 158 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 PIBF1Q8WXW3 757 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RUBCNQ92622 972 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 UBE2FQ969M7 185 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 OSBP2Q969R2 916 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 EXOC4Q96A65 974 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ZNF669Q96BR6 464 aaPredicted RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 INTS12Q96CB8 462 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SHDQ96IW2 340 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 FAM167AQ96KS9 214 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 HS6ST2Q96MM7 605 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ZDHHC15Q96MV8 337 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 AIFM3Q96NN9 605 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 NUDCD1Q96RS6 583 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 EYA3Q99504 573 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SDF4Q9BRK5 362 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 DDX23Q9BUQ8 820 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 STK31Q9BXU1 1019 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 INTS2Q9H0H0 1204 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 MMRN2Q9H8L6 949 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 UPF2Q9HAU5 1272 aaKnown RBP3.92□□□□□ -1.78
SF3B1-203ENST00000414174 SP110Q9HB58 689 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 WASH6PQ9NQA3 447 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 ST7Q9NRC1 585 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 GLRX2Q9NS18 164 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 RXFP3Q9NSD7 469 aa3.92□□□□□ -1.78
SF3B1-203ENST00000414174 IARS2Q9NSE4 1012 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms