RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ZIM3Q96PE6 472 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 CARD9Q9H257 536 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 PLEKHA5Q9HAU0 1116 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 ETAA1Q9NY74 926 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SEPT3Q9UH03 358 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SPATA31A1Q5TZJ5 1347 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 PHF20L1A8MW92 1017 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SEC24DO94855 1032 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SERPINB1P30740 379 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SULT1E1P49888 294 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 HMGCS2P54868 508 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 ACTR2P61160 394 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 PRAMEP78395 509 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 IRAK1P51617 712 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 GRIN1Q05586 938 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 BAATQ14032 418 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 LONRF1Q17RB8 773 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 DNAL1Q4LDG9 190 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 RABGAP1LQ5R372 815 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 TSSK1BQ9BXA7 367 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SMARCAD1Q9H4L7 1026 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 ZNF70Q9UC06 446 aaPredicted RBP14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SLC13A4Q9UKG4 626 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 PLAGL2Q9UPG8 496 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 TECPR2O15040 1411 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 LCP1P13796 627 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 PRLRP16471 622 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 LSP1P33241 339 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 HSD17B4P51659 736 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 IMPG1Q17R60 797 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 BTBD8Q5XKL5 378 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 MCEEQ96PE7 176 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 ADA2Q9NZK5 511 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 NR3C2P08235 984 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 TPI1P60174 286 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 TRPM8Q7Z2W7 1104 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 CATSPER3Q86XQ3 398 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 SEPT1Q8WYJ6 367 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 MED15Q96RN5 788 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 XPO7Q9UIA9 1087 aaKnown RBP14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 ALG6Q9Y672 507 aa14.4□□□□□ -0.1
SMARCA4-202ENST00000413806 H0Y626 953 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 KLRC1P26715 233 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 TPP2P29144 1249 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 RECQLP46063 649 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ACOT2P49753 483 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 TMEM132DQ14C87 1099 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ZC2HC1CQ53FD0 456 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 WDR93Q6P2C0 686 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 PPP1R2P1Q96PQ5 205 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 OSBPL8Q9BZF1 889 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 C17orf75Q9HAS0 396 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 WDR70Q9NW82 654 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 PAK5Q9P286 719 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 AGAP1Q9UPQ3 857 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 TMCC1O94876 653 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 HLA-DRAP01903 254 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 SSTR3P32745 418 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 FNTAP49354 379 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 LRRC36Q1X8D7 754 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 NOA1Q8NC60 698 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ASAP3Q8TDY4 903 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 TMEM143Q96AN5 459 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ULK4Q96C45 1275 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 SH3GL1Q99961 368 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 SIKE1Q9BRV8 207 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 PRDM4Q9UKN5 801 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 E5RI56 91 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 TXNP10599 105 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ZNF200P98182 395 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 GRB10Q13322 594 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 FASTKD1Q53R41 847 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 COQ7Q99807 217 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 KLHL11Q9NVR0 708 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ZC3H7BQ9UGR2 993 aaKnown RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 MAGEB2O15479 319 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 AARSP49588 968 aaKnown RBP eCLIP14.39□□□□□ -0.113e-6■□□□□ 9.5
SMARCA4-202ENST00000413806 RNF219Q5W0B1 726 aaPredicted RBP14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 BARGINQ6ZT62 677 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ARHGAP22Q7Z5H3 698 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 TPCN2Q8NHX9 752 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 SNX19Q92543 992 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 PGBD4Q96DM1 585 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 RSAD1Q9HA92 442 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 ZNF212Q9UDV6 495 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 SALL3Q9BXA9 1300 aa14.39□□□□□ -0.11
SMARCA4-202ENST00000413806 CCT8L1PA6NM43 557 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 VHLP40337 213 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 CCDC85BQ15834 202 aaPredicted RBP14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 UGP2Q16851 508 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 KIF2BQ8N4N8 673 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 DDHD1Q8NEL9 900 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 FUCA2Q9BTY2 467 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 MRGBPQ9NV56 204 aa14.38□□□□□ -0.11
SMARCA4-202ENST00000413806 LMCD1Q9NZU5 365 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms