RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LPPQ93052 612 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 HPDLQ96IR7 371 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 FAXDC2Q96IV6 333 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 C16orf45Q96MC5 204 aaPredicted RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 ZFP42Q96MM3 310 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 DCBLD2Q96PD2 775 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 PPP1R10Q96QC0 940 aaKnown RBP7.13□□□□□ -1.27
VPS41-204ENST00000413141 RPS6KC1Q96S38 1066 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 FTHL17Q9BXU8 183 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 BCO2Q9BYV7 579 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 WNT8AQ9H1J5 351 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 HIPK3Q9H422 1215 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 RSAD1Q9HA92 442 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 RGS18Q9NS28 235 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 RNF19AQ9NV58 838 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 TBX21Q9UL17 535 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 POLIQ9UNA4 740 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 AGAP1Q9UPQ3 857 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 CNTN6Q9UQ52 1028 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 GIT1Q9Y2X7 761 aa7.13□□□□□ -1.27
VPS41-204ENST00000413141 TRIP11Q15643 1979 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ANO9A1A5B4 782 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ARL5CA6NH57 179 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 C9IYK1 514 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 DDX3XO00571 662 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS41-204ENST00000413141 PIRO00625 290 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 INPPL1O15357 1258 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 CYP26A1O43174 497 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 OFD1O75665 1012 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 PARNO95453 639 aaKnown RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 CXCL10P02778 98 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 P4HA1P13674 534 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 CYP11B1P15538 503 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 CAPN2P17655 700 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 CD58P19256 250 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 LRPAP1P30533 357 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ARHGAP25P42331 645 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 RAP1GAPP47736 663 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 SCNN1GP51170 649 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 YWHAEP62258 255 aaKnown RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 TNNC1P63316 161 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 MYO1EQ12965 1108 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 NAB2Q15742 525 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 LRRC26Q2I0M4 334 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 WDR72Q3MJ13 1102 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 TMEM270Q6UE05 265 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ZNF662Q6ZS27 426 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 FAM43BQ6ZT52 329 aaPredicted RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 KIAA1328Q86T90 577 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ECHDC2Q86YB7 292 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 GLYCTKQ8IVS8 523 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 RNF169Q8NCN4 708 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 SLC30A5Q8TAD4 765 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 APBB2Q92870 758 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 PGBD4Q96DM1 585 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 PAWRQ96IZ0 340 aaKnown RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 ZNF560Q96MR9 790 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 GAD1Q99259 594 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 AGPAT1Q99943 283 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.12□□□□□ -1.27
VPS41-204ENST00000413141 PPP1R12CQ9BZL4 782 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 SDCBP2Q9H190 292 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 TSPYL2Q9H2G4 693 aaPredicted RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 SMYD3Q9H7B4 428 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 GOLGA2P5Q9HBQ8 144 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 UBN1Q9NPG3 1134 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ACP6Q9NPH0 428 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 LZTFL1Q9NQ48 299 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 CISHQ9NSE2 258 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 SLC38A7Q9NVC3 462 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 NXF1Q9UBU9 619 aaKnown RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 ADAMTS1Q9UHI8 967 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 NAGPAQ9UK23 515 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 ATP11BQ9Y2G3 1177 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 R3HCC1Q9Y3T6 440 aaKnown RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 PCDHB4Q9Y5E5 795 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 PCDHA13Q9Y5I0 950 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
VPS41-204ENST00000413141 TSC2P49815 1807 aa7.12□□□□□ -1.27
VPS41-204ENST00000413141 SCN5AQ14524 2016 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 LTBP2Q14767 1821 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 RCCD1A6NED2 376 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 PJA2O43164 708 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 CALCAP01258 141 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 THP07101 528 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 MMEP08473 750 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 CLTBP09497 229 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 WEE2P0C1S8 567 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 CHRNB2P17787 502 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 IBSPP21815 317 aaPredicted RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 GNA15P30679 374 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 PNPLA4P41247 253 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 TAF6P49848 677 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 AFF1P51825 1210 aaKnown RBP7.11□□□□□ -1.27
VPS41-204ENST00000413141 CCL23P55773 120 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 FMO1Q01740 532 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 CDR2Q01850 454 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 INCA1Q0VD86 236 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 GRIK3Q13003 919 aa7.11□□□□□ -1.27
VPS41-204ENST00000413141 PTPN14Q15678 1187 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms