RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 TKTP29401 623 aaKnown RBP16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 CREMQ03060 361 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 HYAL1Q12794 435 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 MRPL58Q14197 206 aaKnown RBP16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 SV2CQ496J9 727 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 SCARA3Q6AZY7 606 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 C15orf39Q6ZRI6 1047 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 FRMD5Q7Z6J6 570 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 CEP57Q86XR8 500 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 APPL2Q8NEU8 664 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 LNX1Q8TBB1 728 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 RIN2Q8WYP3 895 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 EMILIN2Q9BXX0 1053 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 TLE6Q9H808 572 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 METTL14Q9HCE5 456 aaKnown RBP16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 FNIP2Q9P278 1114 aa16.64■□□□□ 0.25
TRAPPC12-203ENST00000411973 ARHGEF37A1IGU5 675 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 KPNA7A9QM74 516 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 C2CD2LO14523 706 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 FGFR1OPO95684 399 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 STAU1O95793 577 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 GNA14O95837 355 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 CST3P01034 146 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 KRT19P08727 400 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 CNPP09543 421 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 TYMPP19971 482 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 GTF2H1P32780 548 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 NRIP1P48552 1158 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 MARSP56192 900 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 KCNC3Q14003 757 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 CCDC85BQ15834 202 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 CTC1Q2NKJ3 1217 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 ZACNQ401N2 412 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 TDRD10Q5VZ19 366 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 DSTYKQ6XUX3 929 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 ANKS3Q6ZW76 656 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 EFHBQ8N7U6 833 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 SENP8Q96LD8 212 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 KLHL5Q96PQ7 755 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 SRRTQ9BXP5 876 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 ANO10Q9NW15 660 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 GDAP2Q9NXN4 497 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 ARMCX3Q9UH62 379 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 R3HCC1Q9Y3T6 440 aaKnown RBP16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 BACE2Q9Y5Z0 518 aa16.63■□□□□ 0.25
TRAPPC12-203ENST00000411973 PRUNE2Q8WUY3 3088 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 TSC2P49815 1807 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 PER2O15055 1255 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 TEX28O15482 410 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 CLASP2O75122 1294 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 OAZ2O95190 189 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 C1RP00736 705 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 CYP11A1P05108 521 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 PPP3CAQ08209 521 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 MYO1EQ12965 1108 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 PSMD5Q16401 504 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 STX1AQ16623 288 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 VARS2Q5ST30 1063 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 PRSS55Q6UWB4 352 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 SV2AQ7L0J3 742 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 RBM23Q86U06 439 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 PABPC5Q96DU9 382 aaKnown RBP16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 HPDLQ96IR7 371 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 MTRRQ9UBK8 725 aa16.62■□□□□ 0.25
TRAPPC12-203ENST00000411973 SPTBN5Q9NRC6 3674 aaKnown RBP16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 CYB561D2O14569 222 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 TBC1D4O60343 1298 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 STX10O60499 249 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 VNN1O95497 513 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 ADH1AP07327 375 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 TRIM49P0CI25 452 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 TRIM49CP0CI26 452 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 ODC1P11926 461 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 ATICP31939 592 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 CA8P35219 290 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 GTF2F1P35269 517 aaKnown RBP eCLIP16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 NDUFV1P49821 464 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 ADAM15Q13444 863 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 BIRC3Q13489 604 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 TRPC3Q13507 836 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 TMEM184AQ6ZMB5 413 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 PPFIBP1Q86W92 1011 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 PPM1EQ8WY54 764 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 SLC35C1Q96A29 364 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 CLSTN3Q9BQT9 956 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 OXCT2Q9BYC2 517 aaPredicted RBP16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 VRTNQ9H8Y1 702 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 TMEM8AQ9HCN3 771 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 DSEQ9UL01 958 aa16.61■□□□□ 0.25
TRAPPC12-203ENST00000411973 MTCL1Q9Y4B5 1905 aaKnown RBP16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 H7C4K7 107 aa16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 PHACTR2O75167 634 aa16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 KLRC2P26717 231 aa16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 GCLMP48507 274 aa16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 CLCN4P51793 760 aa16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 TYRO3Q06418 890 aa16.6■□□□□ 0.25
TRAPPC12-203ENST00000411973 NCOA4Q13772 614 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms