RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 LANCL2Q9NS86 450 aa3.33□□□□□ -1.88
HMGB3P2-201ENST00000411913 TMEM140Q9NV12 185 aa3.33□□□□□ -1.88
HMGB3P2-201ENST00000411913 DPP7Q9UHL4 492 aa3.33□□□□□ -1.88
HMGB3P2-201ENST00000411913 MAPRE3Q9UPY8 281 aa3.33□□□□□ -1.88
HMGB3P2-201ENST00000411913 LRP12Q9Y561 859 aa3.33□□□□□ -1.88
HMGB3P2-201ENST00000411913 CDHR4A6H8M9 788 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 TEX33O43247 280 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 PDE8AO60658 829 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 TTLL1O95922 423 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 CYP2D6P10635 497 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 POU3F2P20265 443 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 GATA3P23771 443 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 SOX5P35711 763 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 MMP13P45452 471 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 LSSP48449 732 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 IL2P60568 153 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 RPS7P62081 194 aaKnown RBP3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 CCT2P78371 535 aaKnown RBP3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 TXNRD1Q16881 649 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 SLC18B1Q6NT16 456 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 CLNKQ7Z7G1 428 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 LRRTM3Q86VH5 581 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 QTRT1Q9BXR0 403 aaKnown RBP3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 VPS33BQ9H267 617 aa3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 AJAP1Q9UKB5 411 aaPredicted RBP3.32□□□□□ -1.88
HMGB3P2-201ENST00000411913 PRAMEF33A0A0G2JMD5 474 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 A0A1W2PS29 197 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PRR23D1E9PI22 279 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PPP6CO00743 305 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PRAMEF10O60809 474 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 HNRNPCP07910 306 aaKnown RBP eCLIP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PRR23D2P0DMB1 279 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 SUPT20HL1Q3ZLR7 823 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 CD300EQ496F6 205 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PREPLQ4J6C6 727 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 CNNM4Q6P4Q7 775 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 SEM1Q6ZVN7 128 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 RNF180Q86T96 592 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 RASSF3Q86WH2 238 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 ZDHHC17Q8IUH5 632 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 AHI1Q8N157 1196 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PPM1KQ8N3J5 372 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 CAMKK1Q8N5S9 505 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 Q8NA96 180 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 MYCBPAPQ8TBZ2 947 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 RAX2Q96IS3 184 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 SH2D3AQ9BRG2 576 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 ANP32EQ9BTT0 268 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 TARS2Q9BW92 718 aaKnown RBP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 EBF3Q9H4W6 596 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 SLC23A1Q9UHI7 598 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 RUVBL1Q9Y265 456 aaKnown RBP3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 PCDHB1Q9Y5F3 818 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 ACTL7AQ9Y615 435 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 KAT6AQ92794 2004 aa3.31□□□□□ -1.88
HMGB3P2-201ENST00000411913 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 CCDC187A0A096LP49 1063 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 TCRBV7S2A1N4TA0A589 114 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 FAM83GA6ND36 823 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 MYMKA6NI61 221 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 CYSRT1A8MQ03 144 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 TARM1B6A8C7 271 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 KIAA0391O15091 583 aaKnown RBP3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 URI1O94763 535 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 FKBP9O95302 570 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 LATS1O95835 1130 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 FCER1AP12319 257 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 FPR1P21462 350 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 CNGA1P29973 690 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 CCKARP32238 428 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 GUCY1A2P33402 732 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 NR4A2P43354 598 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 SLFN5Q08AF3 891 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 LAMB3Q13751 1172 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 MIDNQ504T8 468 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 PXDC1Q5TGL8 231 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 SLC2A7Q6PXP3 512 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 ZNF66Q6ZN08 573 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 FKBP9P1Q75LS8 142 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 B3GALNT2Q8NCR0 500 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 SMRP1Q8NCR6 262 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 OR2W6PQ8NHA6 318 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 SLC5A5Q92911 643 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 SPRTNQ9H040 489 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 TYW1Q9NV66 732 aaKnown RBP3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 MTMR4Q9NYA4 1195 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 ATP8A1Q9Y2Q0 1164 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 NR2E3Q9Y5X4 410 aa3.3□□□□□ -1.88
HMGB3P2-201ENST00000411913 TOP3BO95985 862 aaKnown RBP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 KCNA2P16389 499 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CPEP16870 476 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CDK11BP21127 795 aaKnown RBP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 ADCYAP1R1P41586 468 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CCT8P50990 548 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 NXPH1P58417 271 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CREMQ03060 361 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 RABEP1Q15276 862 aa3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 PCBP1Q15365 356 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB3P2-201ENST00000411913 CT47A1Q5JQC4 288 aaPredicted RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms