RNA–Protein interactions for RNA: ENST00000407595.2

CCDC85A-201, Transcript of coiled-coil domain containing 85A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC85A, Length 3,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85A-201ENST00000407595 ACSF2Q96CM8 615 aaPredicted RBP16.61■□□□□ 0.25
CCDC85A-201ENST00000407595 ASCC2Q9H1I8 757 aaPredicted RBP16.61■□□□□ 0.25
CCDC85A-201ENST00000407595 FOXO6A8MYZ6 492 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 GHRP10912 638 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 P4HA1P13674 534 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 TWF2Q6IBS0 349 aaKnown RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 C1orf186Q6ZWK4 172 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 APBB1IPQ7Z5R6 666 aaPredicted RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 ERICH1Q86X53 443 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 BBOF1Q8ND07 529 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 CDCA5Q96FF9 252 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 SNF8Q96H20 258 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 MRPL4Q9BYD3 311 aaKnown RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 STRCQ7RTU9 1775 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 TLR3O15455 904 aaKnown RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 GYG2O15488 501 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 OPHN1O60890 802 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 KRT1P04264 644 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 ZNF157P51786 506 aaPredicted RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 SNAPC2Q13487 334 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 CEP128Q6ZU80 1094 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 ANKRD63C9JTQ0 380 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 GRAP2O75791 330 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 VTNP04004 478 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 OATP04181 439 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 ESRRAP11474 423 aaPredicted RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 RARGP13631 454 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 MARCKSL1P49006 195 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 BBS9Q3SYG4 887 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 SLC13A5Q86YT5 568 aaPredicted RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 HSD17B14Q9BPX1 270 aa16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 MARF1Q9Y4F3 1742 aaKnown RBP16.6■□□□□ 0.25
CCDC85A-201ENST00000407595 PKD1L3Q7Z443 1732 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ASAP2O43150 1006 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 DCTN3O75935 186 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 UPP2O95045 317 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 SKIP12755 728 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 NCOA4Q13772 614 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 KRT81Q14533 505 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ASTE1Q2TB18 679 aaPredicted RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ARHGAP24Q8N264 748 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 RSAD2Q8WXG1 361 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 KLF6Q99612 283 aaPredicted RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 IQCA1LA6NCM1 817 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 CAPN9O14815 690 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 CDH16O75309 829 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 DNAJC8O75937 253 aaPredicted RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 MAN1A1P33908 653 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 MRPS9P82933 396 aaKnown RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 PPP6R3Q5H9R7 873 aaPredicted RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 CFAP157Q5JU67 520 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 PHLDB3Q6NSJ2 640 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 TRMT10CQ7L0Y3 403 aaKnown RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 TTC17Q96AE7 1141 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ZSWIM1Q9BR11 485 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 MIS12Q9H081 205 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 SLC12A6Q9UHW9 1150 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 GGA2Q9UJY4 613 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 USH1CQ9Y6N9 552 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ITGB4P16144 1822 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 NID2Q14112 1375 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 I3L4J1 428 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 RIPK2O43353 540 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 C6orf222P0C671 652 aaPredicted RBP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 FKBP1CQ5VVH2 108 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 CCT6BQ92526 530 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 HSPH1Q92598 858 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 TMEM237Q96Q45 408 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 RBM15Q96T37 977 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 NPHS2Q9NP85 383 aa16.59■□□□□ 0.25
CCDC85A-201ENST00000407595 ZNF286BP0CG31 522 aa16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 PYGMP11217 842 aa16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 NLRP11P59045 1033 aaKnown RBP16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 YWHAGP61981 247 aaKnown RBP eCLIP16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 CDR2Q01850 454 aa16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 GPC2Q8N158 579 aa16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 GPRASP2Q96D09 838 aa16.58■□□□□ 0.25
CCDC85A-201ENST00000407595 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 M0R2N6 131 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 RTN2O75298 545 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 GSTA1P08263 222 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 GPC3P51654 580 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 AMHR2Q16671 573 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 SV2AQ7L0J3 742 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 ZBED8Q8IZ13 594 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 OR6J1Q8NGC5 347 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 RPS6KC1Q96S38 1066 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 TRABDQ9H4I3 376 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 A8MUI8 341 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 H7C0C1 242 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 EIF3DO15371 548 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 SLC16A3O15427 465 aaKnown RBP16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 SNX3O60493 162 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 SUPT20HL2P0C7V6 817 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 POLR2BP30876 1174 aaKnown RBP16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 ATP5OP48047 213 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 RGS7P49802 495 aa16.58■□□□□ 0.24
CCDC85A-201ENST00000407595 SLC47A2Q86VL8 602 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms