RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EMBQ6PCB8 327 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 SUGP1Q8IWZ8 645 aaKnown RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 DBF4BQ8NFT6 615 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 CTNNBL1Q8WYA6 563 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 EXOC4Q96A65 974 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 IFT74Q96LB3 600 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 SAMD11Q96NU1 681 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 NAP1L3Q99457 506 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 POP1Q99575 1024 aaKnown RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 KIAA1586Q9HCI6 787 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 FAM86C1Q9NVL1 165 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 SEPT9Q9UHD8 586 aaPredicted RBP13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 WDR81Q562E7 1941 aa13.85□□□□□ -0.19
SMARCB1-203ENST00000407082 WDFY4Q6ZS81 3184 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 TMEM150BA6NC51 233 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 TMEM221A6NGB7 291 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 F8VZ95 297 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 CCDC188H7C350 402 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 M0R296 226 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF185O15231 689 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 DGAT1O75907 488 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 TMEM253P0C7T8 217 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 THPOP40225 353 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 AARSP49588 968 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 APBA1Q02410 837 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 C2orf54Q08AI8 447 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 KCNA1Q09470 495 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 PTK7Q13308 1070 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 HIC1Q14526 733 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 MBTPS1Q14703 1052 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 ZNF484Q5JVG2 852 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 TAF3Q5VWG9 929 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 ANO5Q75V66 913 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 RHOT2Q8IXI1 618 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 DAW1Q8N136 415 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 ACTRT1Q8TDG2 376 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 TMC2Q8TDI7 906 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 COG1Q8WTW3 980 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 TRAPPC12Q8WVT3 735 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 EDAQ92838 391 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 SH2D3AQ9BRG2 576 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 NTPCRQ9BSD7 190 aaKnown RBP13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 NIFKQ9BYG3 293 aaKnown RBP13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 STIM2Q9P246 746 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 SUCLA2Q9P2R7 463 aaPredicted RBP13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 AMFRQ9UKV5 643 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 ZFHX2Q9C0A1 2572 aaPredicted RBP13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 KAT6AQ92794 2004 aa13.84□□□□□ -0.19
SMARCB1-203ENST00000407082 A6NNZ2 444 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 TREHO43280 583 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 NCK2O43639 380 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 OPA1O60313 960 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 KIF4AO95239 1232 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 HOXC8P31273 242 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 LTBRP36941 435 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 MFAP3P55082 362 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 HTRA4P83105 476 aaPredicted RBP13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 PAK2Q13177 524 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 SMAD2Q15796 467 aaKnown RBP13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 TUBB8Q3ZCM7 444 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 MTERF2Q49AM1 385 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 MARCH8Q5T0T0 291 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 ALS2CLQ60I27 953 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 PLA2G4FQ68DD2 849 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 SMYD5Q6GMV2 418 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 ENOSF1Q7L5Y1 443 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 PEX26Q7Z412 305 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 WNT8BQ93098 351 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 CEP170P1Q96L14 293 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 KMT5AQ9NQR1 393 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 CYP26B1Q9NR63 512 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 HSPBP1Q9NZL4 362 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 NENFQ9UMX5 172 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 PPME1Q9Y570 386 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 ZDBF2Q9HCK1 2354 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 COL1A2P08123 1366 aa13.83□□□□□ -0.2
SMARCB1-203ENST00000407082 ANKRD62A6NC57 917 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 ZBTB42B2RXF5 422 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 PDE2AO00408 941 aaPredicted RBP13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 POLR3GO15318 223 aaPredicted RBP13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 MBTPS2O43462 519 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 GARTP22102 1010 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 PEX3P56589 373 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 ADAM17P78536 824 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 DLX2Q07687 328 aaPredicted RBP13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 TCEAL1Q15170 157 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 TARBP2Q15633 366 aaKnown RBP13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 MTHFD1LQ6UB35 978 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 TRIM67Q6ZTA4 783 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 SLFN11Q7Z7L1 901 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 EXOC8Q8IYI6 725 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 TPCN2Q8NHX9 752 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 SLC30A5Q8TAD4 765 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 SP7Q8TDD2 431 aaPredicted RBP13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 RFFLQ8WZ73 363 aa13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 ATOH1Q92858 354 aaPredicted RBP13.82□□□□□ -0.2
SMARCB1-203ENST00000407082 ZBTB10Q96DT7 871 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms