RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 HOXD13P35453 343 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 SOX5P35711 763 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 CACNA2D1P54289 1103 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 STRN3Q13033 797 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 DRAP1Q14919 205 aaPredicted RBP17.23■□□□□ 0.35
LSP1-204ENST00000406638 ZNF568Q3ZCX4 644 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 SNX30Q5VWJ9 437 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
LSP1-204ENST00000406638 SCG3Q8WXD2 468 aaKnown RBP17.23■□□□□ 0.35
LSP1-204ENST00000406638 INPP5DQ92835 1189 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 GRAMD1AQ96CP6 724 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 IKZF4Q9H2S9 585 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 CTTNBP2NLQ9P2B4 639 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 PHTF1Q9UMS5 762 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 USP20Q9Y2K6 914 aa17.23■□□□□ 0.35
LSP1-204ENST00000406638 TP73O15350 636 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 SPAG7O75391 227 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 SLITRK3O94933 977 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 RPA1P27694 616 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 PGM5Q15124 567 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 TRIP13Q15645 432 aaPredicted RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 LRRC23Q53EV4 343 aaPredicted RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 WASHC2DQ5SRD0 308 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 PRUNE1Q86TP1 453 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 CPNE8Q86YQ8 564 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 UBL4BQ8N7F7 174 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 NRG4Q8WWG1 115 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 NAALADL1Q9UQQ1 740 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 CSADQ9Y600 493 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 USH1CQ9Y6N9 552 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 PASKQ96RG2 1323 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 C19orf81C9J6K1 198 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 PYGBP11216 843 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 CHRNB2P17787 502 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 TNFAIP3P21580 790 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 MESDQ14696 234 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 KNOP1Q1ED39 458 aaKnown RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 DDX50Q9BQ39 737 aaKnown RBP17.22■□□□□ 0.35
LSP1-204ENST00000406638 OCEL1Q9H607 264 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 BTBD7Q9P203 1132 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 STOML1Q9UBI4 398 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 LRCH1Q9Y2L9 728 aa17.22■□□□□ 0.35
LSP1-204ENST00000406638 SIGLEC16A6NMB1 481 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 EYA4O95677 639 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 VHLP40337 213 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 SERPINB4P48594 390 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 IL9RQ01113 521 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 RCN1Q15293 331 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 DSTYKQ6XUX3 929 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 EPM2AIP1Q7L775 607 aaPredicted RBP17.21■□□□□ 0.35
LSP1-204ENST00000406638 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 HSD17B14Q9BPX1 270 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 ADAMTS5Q9UNA0 930 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.35
LSP1-204ENST00000406638 GLTPD2A6NH11 291 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 THAP12O43422 761 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 TTC4O95801 387 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 KCNA1Q09470 495 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 ARHGAP44Q17R89 818 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 TAF1BQ53T94 588 aaPredicted RBP17.21■□□□□ 0.35
LSP1-204ENST00000406638 SEL1L2Q5TEA6 688 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 DTX3LQ8TDB6 740 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 ZSWIM1Q9BR11 485 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 PDCD2LQ9BRP1 358 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 PXMP2Q9NR77 195 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 DNAJC12Q9UKB3 198 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 PARP14Q460N5 1801 aa17.21■□□□□ 0.35
LSP1-204ENST00000406638 OTOFQ9HC10 1997 aa17.21■□□□□ 0.34
LSP1-204ENST00000406638 KDM3AQ9Y4C1 1321 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 DHX15O43143 795 aaKnown RBP17.2■□□□□ 0.34
LSP1-204ENST00000406638 COMTP21964 271 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 CYFIP1Q7L576 1253 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 MCF2L2Q86YR7 1114 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 C1orf54Q8WWF1 131 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 REEP2Q9BRK0 252 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 ASIC3Q9UHC3 531 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 ATP8B3O60423 1300 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 KRT36O76013 467 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 NR3C1P04150 777 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 SKIP12755 728 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 HSPA6P17066 643 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 MARK3P27448 753 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 CNTN2Q02246 1040 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 CLUL1Q15846 466 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 ARHGEF16Q5VV41 709 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 TRIM74Q86UV6 250 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 TRIM73Q86UV7 250 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 SFR1Q86XK3 245 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 BICD1Q96G01 975 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 TRAF3IP3Q9Y228 551 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 CLEC11AQ9Y240 323 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 STARD13Q9Y3M8 1113 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 ASTN1O14525 1302 aa17.2■□□□□ 0.34
LSP1-204ENST00000406638 ANKRD62A6NC57 917 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms