RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 RPL10LQ96L21 214 aaKnown RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 SNX22Q96L94 193 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 PPP1R16BQ96T49 567 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 P2RX7Q99572 595 aaKnown RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 STK33Q9BYT3 514 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 MAF1Q9H063 256 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 TM7SF3Q9NS93 570 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 FAM30AQ9NZY2 134 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 COL20A1Q9P218 1284 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 CNOT6Q9ULM6 557 aaKnown RBP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 CLCA2Q9UQC9 943 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 PLEKHM1Q9Y4G2 1056 aa5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB3P18-201ENST00000406327 GOLGA6L3A6NEY3 463 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 TCAF2A6NFQ2 919 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 CLCA1A8K7I4 914 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 KIAA0391O15091 583 aaKnown RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 INMTO95050 263 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 ABHD16AO95870 558 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 CSTBP04080 98 aaKnown RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 GJB1P08034 283 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 MED14OSP0DP75 135 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 HARSP12081 509 aaKnown RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 IDEP14735 1019 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 HDCP19113 662 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 PI3P19957 117 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 RENBPP51606 427 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 RPS16P62249 146 aaKnown RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 NOMO3P69849 1222 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 DLX2Q07687 328 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 MRPL49Q13405 166 aaKnown RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 MPEG1Q2M385 716 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 SLC35G1Q2M3R5 365 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 KRTAP19-4Q3LI73 84 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 VWA3BQ502W6 1294 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 C3orf38Q5JPI3 329 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 MCTP2Q6DN12 878 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 CATSPERGQ6ZRH7 1159 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 RFX8Q6ZV50 586 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 RNF44Q7L0R7 432 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 TMEM151BQ8IW70 566 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 CARFQ8N187 725 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 GIMAP8Q8ND71 665 aaPredicted RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 ADAMTS17Q8TE56 1095 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 BORCS6Q96GS4 357 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 ENKD1Q9H0I2 346 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 A1CFQ9NQ94 594 aaKnown RBP5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 STK32BQ9NY57 414 aa5.66□□□□□ -1.5
HMGB3P18-201ENST00000406327 CXorf49A8MYA2 514 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 F8W8V4 182 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 ETV2O00321 342 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 PLA2G6O60733 806 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 FARP2O94887 1054 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 MT-ND5P03915 603 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 MYL4P12829 197 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 XRCC6P12956 609 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 CD53P19397 219 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 ALDH9A1P49189 494 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 CLRN1P58418 232 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 RAC3P60763 192 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 KIAA2012Q0VF49 1180 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 AMOTQ4VCS5 1084 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 MFSD14BQ5SR56 506 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF529Q6P280 563 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 FBXO38Q6PIJ6 1188 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 PLEKHH3Q7Z736 793 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 ANKRD18AQ8IVF6 992 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 YAF2Q8IY57 180 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 MYCT1Q8N699 235 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 CELF5Q8N6W0 485 aaKnown RBP5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 TRAPPC12Q8WVT3 735 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 SCAMP4Q969E2 229 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 CEP95Q96GE4 821 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 MOGAT1Q96PD6 335 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 TCF25Q9BQ70 676 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 PAGR1Q9BTK6 254 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 ADAM7Q9H2U9 754 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 ZNF69Q9UC07 566 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 HDAC5Q9UQL6 1122 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 LZTS1Q9Y250 596 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 KCTD3Q9Y597 815 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 SLC4A7Q9Y6M7 1214 aa5.65□□□□□ -1.5
HMGB3P18-201ENST00000406327 WIZO95785 1651 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 A0A1W2PRX2 142 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 AREL1O15033 823 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 POMCP01189 267 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 CARSP49589 748 aaKnown RBP5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 ADAM8P78325 824 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 HTRA4P83105 476 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 SATB1Q01826 763 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 FSTL1Q12841 308 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 ZACNQ401N2 412 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 MFSD5Q6N075 450 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 LDHAL6AQ6ZMR3 332 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 DOK3Q7L591 496 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 MICU3Q86XE3 530 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 KBTBD2Q8IY47 623 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 CCDC150Q8NCX0 1101 aa5.64□□□□□ -1.51
HMGB3P18-201ENST00000406327 SHCBP1Q8NEM2 672 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms