RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 KITP10721 976 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 NPR1P16066 1061 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 HIBADHP31937 336 aaKnown RBP6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 PIK3CGP48736 1102 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 EXOSC9Q06265 439 aaKnown RBP6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 FZD5Q13467 585 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 SAFBQ15424 915 aaKnown RBP eCLIP6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 KHDC1LQ5JSQ8 128 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 DARS2Q6PI48 645 aaKnown RBP6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 ADOQ96SZ5 270 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 NEU1Q99519 415 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 MNTQ99583 582 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 GPR87Q9BY21 358 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 ABCC10Q5T3U5 1492 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 WDR7Q9Y4E6 1490 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 USP19O94966 1318 aa6.2□□□□□ -1.42
HMGB3P19-201ENST00000403971 CDC42BPBQ9Y5S2 1711 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 PREX2Q70Z35 1606 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 ABCA9Q8IUA7 1624 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 KRTAP9-6A0A140TA67 174 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 A0A1W2PPL8 197 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 PMM2O15305 246 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 HAUS5O94927 633 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 AGFG2O95081 481 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 ALAS1P13196 640 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 PEX2P28328 305 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 CTSWP56202 376 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 PSMC1P62191 440 aaKnown RBP6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 FAM193AP78312 1265 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 GPSM2P81274 684 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 SEMA5AQ13591 1074 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 FBLN7Q53RD9 439 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 UTP14CQ5TAP6 766 aaKnown RBP6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 IL31Q6EBC2 164 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 DRICH1Q6PGQ1 229 aaPredicted RBP6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 IL31RAQ8NI17 732 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 TBC1D15Q8TC07 691 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 BRIX1Q8TDN6 353 aaKnown RBP6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 LRTOMTQ8WZ04 291 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 FAM89AQ96GI7 184 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 MRGPRX1Q96LB2 322 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 DEF6Q9H4E7 631 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 SARS2Q9NP81 518 aaKnown RBP6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 SIDT1Q9NXL6 827 aaKnown RBP6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 JKAMPQ9P055 326 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 ARAP3Q8WWN8 1544 aa6.19□□□□□ -1.42
HMGB3P19-201ENST00000403971 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 MYOM3Q5VTT5 1437 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 RRBP1Q9P2E9 1410 aaKnown RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 K7ESM1 405 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 GOLIM4O00461 696 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 PHGDHO43175 533 aaKnown RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 PQBP1O60828 265 aaKnown RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 GJB1P08034 283 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 APOBEC3AP31941 199 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 NEK3P51956 506 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 CACNB3P54284 484 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 SOX8P57073 446 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 NOMO3P69849 1222 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 NHLH2Q02577 135 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 DCAF17Q5H9S7 520 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 METTL24Q5JXM2 366 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 SYCP2LQ5T4T6 812 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 METRNLQ641Q3 311 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 ZNF365Q70YC5 407 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 FITM2Q8N6M3 262 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 PCSK9Q8NBP7 692 aaKnown RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 TMIEQ8NEW7 156 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 NLGN4YQ8NFZ3 816 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 CXorf38Q8TB03 319 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 C8orf49Q96NF6 230 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 P2RX7Q99572 595 aaKnown RBP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 BRD9Q9H8M2 597 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 RSAD1Q9HA92 442 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 FAM30AQ9NZY2 134 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 CLCA2Q9UQC9 943 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 GLI2P10070 1586 aa6.18□□□□□ -1.42
HMGB3P19-201ENST00000403971 MIA2Q96PC5 1412 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 CCDC78A2IDD5 438 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 ZNF785A8K8V0 405 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 MYL3P08590 195 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 GNAI3P08754 354 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 SLC5A1P13866 664 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 SLC7A1P30825 629 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 MAN2A2P49641 1150 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 GNAI1P63096 354 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 CRHR2Q13324 411 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 RRP1BQ14684 758 aaKnown RBP6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 KIF22Q14807 665 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 HS1BP3Q53T59 392 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 NOMO2Q5JPE7 1267 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 ZFPM1Q8IX07 1006 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 CHST13Q8NET6 341 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 KLHL32Q96NJ5 620 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 TLR10Q9BXR5 811 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 TEX101Q9BY14 249 aa6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 GNL3LQ9NVN8 582 aaKnown RBP6.17□□□□□ -1.42
HMGB3P19-201ENST00000403971 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms