RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 HOXD13P35453 343 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 AARSP49588 968 aaKnown RBP eCLIP18.2■□□□□ 0.55e-7■■■■■ 34.9
CSNK1D-205ENST00000403276 ZNF280DQ6N043 979 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 BMP8AQ7Z5Y6 402 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 LEO1Q8WVC0 666 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 DPP3Q9NY33 737 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 DNMT3BQ9UBC3 853 aaKnown RBP18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 SERTAD1Q9UHV2 236 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 KCNH3Q9ULD8 1083 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 TSC2P49815 1807 aa18.2■□□□□ 0.5
CSNK1D-205ENST00000403276 ANO9A1A5B4 782 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 PRRG1O14668 218 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 XYLBO75191 536 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 OR4Q2P0C623 313 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 ATF2P15336 505 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 GARTP22102 1010 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 YWHAHQ04917 246 aaPredicted RBP18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 CUL4BQ13620 913 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 CNNM4Q6P4Q7 775 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 RNF19BQ6ZMZ0 732 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 UBALD2Q8IYN6 164 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 ITFG1Q8TB96 612 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 FAM84AQ96KN4 292 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 SENP8Q96LD8 212 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 MFSD14AQ96MC6 490 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 TMEM206Q9H813 350 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 CYP4F11Q9HBI6 524 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.19■□□□□ 0.57e-8■■■■■ 49.6
CSNK1D-205ENST00000403276 EPS15L1Q9UBC2 864 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 C2CD2Q9Y426 696 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 ZDBF2Q9HCK1 2354 aa18.19■□□□□ 0.5
CSNK1D-205ENST00000403276 KMT2EQ8IZD2 1858 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 A0A1B0GVL5 298 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 OAZ2O95190 189 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 IL18RAPO95256 599 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 LDHAP00338 332 aaKnown RBP18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 LAMP2P13473 410 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 CPB1P15086 417 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 POU5F1Q01860 360 aaKnown RBP18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 ADCY1Q08828 1119 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 TDGQ13569 410 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 FAM26FQ5R3K3 315 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 SCARA3Q6AZY7 606 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 ARMCX5Q6P1M9 558 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 USP37Q86T82 979 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 BRSK2Q8IWQ3 736 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 SPATA32Q96LK8 384 aa18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 RBAKQ9NYW8 714 aaPredicted RBP18.18■□□□□ 0.5
CSNK1D-205ENST00000403276 ARHGEF37A1IGU5 675 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 NARSO43776 548 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 EXTL3O43909 919 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 LRG1P02750 347 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 KRT85P78386 507 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 TFAMQ00059 246 aaKnown RBP18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 TPGS2Q68CL5 300 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 STXBP4Q6ZWJ1 553 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 UNC13DQ70J99 1090 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 EPM2AIP1Q7L775 607 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 NELFCDQ8IXH7 590 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 TCEAL8Q8IYN2 117 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 CEP57L1Q8IYX8 460 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 FBXL6Q8N531 539 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 ZNF507Q8TCN5 953 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 PGLYRP2Q96PD5 576 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 TMEM209Q96SK2 561 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 MAGEF1Q9HAY2 307 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 PDE11AQ9HCR9 933 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 IGSF9Q9P2J2 1179 aa18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 CIZ1Q9ULV3 898 aaPredicted RBP18.17■□□□□ 0.5
CSNK1D-205ENST00000403276 ACTN4O43707 911 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 VNN2O95498 520 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 PFKFB1P16118 471 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 TYMPP19971 482 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 CDR1P51861 262 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 NUCB2P80303 420 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 EHHADHQ08426 723 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 PABPC1LQ4VXU2 614 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 OVOS1Q6IE37 1185 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 RTL10Q7L3V2 364 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 GPD1LQ8N335 351 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 SLC44A3Q8N4M1 653 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 ING5Q8WYH8 240 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 FGF13Q92913 245 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 PYM1Q9BRP8 204 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 SLC39A2Q9NP94 309 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 AFF4Q9UHB7 1163 aaKnown RBP18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 CDH7Q9ULB5 785 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 INSL5Q9Y5Q6 135 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 WDFY4Q6ZS81 3184 aa18.16■□□□□ 0.5
CSNK1D-205ENST00000403276 CYB561D2O14569 222 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 CLIC2O15247 247 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 EIF3DO15371 548 aaKnown RBP eCLIP18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 RHOP08100 348 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 POU2F2P09086 479 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 SLFN14P0C7P3 912 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 ODC1P11926 461 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 PTPN2P17706 415 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 CMA1P23946 247 aa18.15■□□□□ 0.5
CSNK1D-205ENST00000403276 TAF6P49848 677 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms