RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 ELF2Q15723 593 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 ZBTB6Q15916 424 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 PTGISQ16647 500 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 WDR72Q3MJ13 1102 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 SLAIN1Q8ND83 568 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 APOL6Q9BWW8 343 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 SDCBP2Q9H190 292 aa27.4■■□□□ 1.98
CPNE1-205ENST00000401607 TRIP11Q15643 1979 aa27.39■■□□□ 1.98
CPNE1-205ENST00000401607 TCP1P17987 556 aaKnown RBP27.39■■□□□ 1.98
CPNE1-205ENST00000401607 AKAP5P24588 427 aa27.39■■□□□ 1.98
CPNE1-205ENST00000401607 RHOT2Q8IXI1 618 aa27.39■■□□□ 1.98
CPNE1-205ENST00000401607 COG1Q8WTW3 980 aa27.39■■□□□ 1.98
CPNE1-205ENST00000401607 CAPZA3Q96KX2 299 aa27.39■■□□□ 1.98
CPNE1-205ENST00000401607 PACSIN2Q9UNF0 486 aaPredicted RBP27.39■■□□□ 1.98
CPNE1-205ENST00000401607 HTTP42858 3142 aa27.39■■□□□ 1.97
CPNE1-205ENST00000401607 STAU1O95793 577 aaKnown RBP27.38■■□□□ 1.97
CPNE1-205ENST00000401607 RAP1GAPP47736 663 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 HADHBP55084 474 aaKnown RBP27.38■■□□□ 1.97
CPNE1-205ENST00000401607 RBP5P82980 135 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 ITGA7Q13683 1181 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 LHX8Q68G74 356 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 SMG8Q8ND04 991 aaKnown RBP27.38■■□□□ 1.97
CPNE1-205ENST00000401607 HPDLQ96IR7 371 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 PSMB7Q99436 277 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 RNF39Q9H2S5 420 aa27.38■■□□□ 1.97
CPNE1-205ENST00000401607 THAP12O43422 761 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 BUB1BO60566 1050 aaPredicted RBP27.37■■□□□ 1.97
CPNE1-205ENST00000401607 CABYRO75952 493 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 RPLP2P05387 115 aaKnown RBP27.37■■□□□ 1.97
CPNE1-205ENST00000401607 CREG2Q8IUH2 290 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 ANKRD7Q92527 254 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 UBXN4Q92575 508 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 MMS19Q96T76 1030 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 SMYD3Q9H7B4 428 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 IPPQ9Y573 584 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 PDCD11Q14690 1871 aaKnown RBP27.37■■□□□ 1.97
CPNE1-205ENST00000401607 ATMINO43313 823 aaPredicted RBP27.37■■□□□ 1.97
CPNE1-205ENST00000401607 RPS6KA5O75582 802 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 PRMT2P55345 433 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 YWHAEP62258 255 aaKnown RBP27.37■■□□□ 1.97
CPNE1-205ENST00000401607 ZNF394Q53GI3 561 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 GLRA4Q5JXX5 417 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 ZNF606Q8WXB4 792 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 CYFIP2Q96F07 1278 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 TUBGCP4Q9UGJ1 667 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 GTF3C4Q9UKN8 822 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 ST3GAL5Q9UNP4 418 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 STXBP5LQ9Y2K9 1186 aa27.37■■□□□ 1.97
CPNE1-205ENST00000401607 FRMPD3Q5JV73 1810 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CTAGE15A4D2H0 777 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 PDE2AO00408 941 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CYP1A2P05177 515 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CTAGE8P0CG41 777 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CXCR5P32302 372 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CDH8P55286 799 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CENPCQ03188 943 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 ARHGEF6Q15052 776 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 XKR4Q5GH76 650 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 NAA35Q5VZE5 725 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 TWF2Q6IBS0 349 aaKnown RBP27.36■■□□□ 1.97
CPNE1-205ENST00000401607 TRIM72Q6ZMU5 477 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CTAGE6Q86UF2 777 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CTAGE4Q8IX94 777 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 SYCE1Q8N0S2 351 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 GOLGA1Q92805 767 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 ZNF653Q96CK0 615 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 ZSWIM1Q9BR11 485 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 PDCL3Q9H2J4 239 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 HMX1Q9NP08 348 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-205ENST00000401607 ABCB6Q9NP58 842 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CTTNBP2NLQ9P2B4 639 aa27.36■■□□□ 1.97
CPNE1-205ENST00000401607 CHORDC1Q9UHD1 332 aaPredicted RBP27.36■■□□□ 1.97
CPNE1-205ENST00000401607 GRK4P32298 578 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 SSTR3P32745 418 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-205ENST00000401607 THPOP40225 353 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 NOMO3P69849 1222 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 TEX35Q5T0J7 233 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 DAAM2Q86T65 1068 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 PASD1Q8IV76 773 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 CPA5Q8WXQ8 436 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 C18orf25Q96B23 403 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-205ENST00000401607 RNF19AQ9NV58 838 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 KLK14Q9P0G3 267 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 PTCH2Q9Y6C5 1203 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 MTA2O94776 668 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 PTPN11Q06124 597 aaPredicted RBP27.35■■□□□ 1.97
CPNE1-205ENST00000401607 CKAP4Q07065 602 aaKnown RBP27.35■■□□□ 1.97
CPNE1-205ENST00000401607 NT5DC3Q86UY8 548 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 BEST2Q8NFU1 509 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 OSBPL7Q9BZF2 842 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 CYP3A43Q9HB55 503 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 TRMT13Q9NUP7 481 aaKnown RBP27.35■■□□□ 1.97
CPNE1-205ENST00000401607 PARP2Q9UGN5 583 aa27.35■■□□□ 1.97
CPNE1-205ENST00000401607 MOXD2PA6NHM9 499 aa27.34■■□□□ 1.97
CPNE1-205ENST00000401607 PPEF2O14830 753 aa27.34■■□□□ 1.97
CPNE1-205ENST00000401607 KIF4AO95239 1232 aa27.34■■□□□ 1.97
CPNE1-205ENST00000401607 BRD2P25440 801 aaKnown RBP27.34■■□□□ 1.97
CPNE1-205ENST00000401607 PTPROQ16827 1216 aa27.34■■□□□ 1.97
CPNE1-205ENST00000401607 MCOLN2Q8IZK6 566 aa27.34■■□□□ 1.97
CPNE1-205ENST00000401607 ARRDC4Q8NCT1 418 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms