RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 PYGMP11217 842 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 COPB1P53618 953 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ACAD11Q709F0 780 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SYT2Q8N9I0 419 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 PMM1Q92871 262 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ZKSCAN4Q969J2 545 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 CPVLQ9H3G5 476 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 DNAJC5Q9H3Z4 198 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 CYP4F11Q9HBI6 524 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 AGO2Q9UKV8 859 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ANKARQ7Z5J8 1434 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 PPP6R2O75170 966 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 FGFR1P11362 822 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 HOXA7P31268 230 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 MLH1P40692 756 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 GCLMP48507 274 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 AARSP49588 968 aaKnown RBP eCLIP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 MRPS35P82673 323 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 MDM2Q00987 491 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 DYNC1I2Q13409 638 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 HIST2H2ACQ16777 129 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 MIIPQ5JXC2 388 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 HIST2H2AA3Q6FI13 130 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 WDR75Q8IWA0 830 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 PBKQ96KB5 322 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 DNAJC17Q9NVM6 304 aaKnown RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 N6AMT1Q9Y5N5 214 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ALOX15P16050 662 aaPredicted RBP11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 SLCO1A2P46721 670 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 NPY2RP49146 381 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 BCAR1P56945 870 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 CTXN3Q4LDR2 81 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 NAALADL2Q58DX5 795 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 HLA-DQA1Q5Y7H0 255 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 ATXN7L3BQ96GX2 97 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 TUBGCP2Q9BSJ2 902 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 AASDHPPTQ9NRN7 309 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 NRBP1Q9UHY1 535 aa11.51□□□□□ -0.57
CACNA1C-210ENST00000399606 KIF1BO60333 1816 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 RHOBTB1O94844 696 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ENO2P09104 434 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ATP6V1C1P21283 382 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ERFP50548 548 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC16A1P53985 500 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 PANX2Q96RD6 677 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 LXNQ9BS40 222 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 STMN3Q9NZ72 180 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 CALB1P05937 261 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 PLCG1P19174 1290 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 SPATA1Q5VX52 437 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 P2RX5Q93086 422 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 TMEM39BQ9GZU3 492 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ATXN3LQ9H3M9 355 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 L2HGDHQ9H9P8 463 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 CRLS1Q9UJA2 301 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 RUVBL2Q9Y230 463 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 PLEKHG1Q9ULL1 1385 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 MAGEB2O15479 319 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 MEFVO15553 781 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 TBXAS1P24557 533 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 C6orf118Q5T5N4 469 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 RBM23Q86U06 439 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 JAMLQ86YT9 394 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 NLNQ9BYT8 704 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 PCDHA10Q9Y5I2 948 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 MYMKA6NI61 221 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 DAB1O75553 588 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 GUCY1A2P33402 732 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 CNGA2Q16280 664 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 NOTUMQ6P988 496 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 HEATR4Q86WZ0 1026 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC35F6Q8N357 371 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 LRRC71Q8N4P6 559 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 ST13P5Q8NFI4 369 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 TMEM60Q9H2L4 133 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 APOA1P02647 267 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 PCSK1P29120 753 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 CDC25AP30304 524 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 EFNA5P52803 228 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 COPS2P61201 443 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 RESTQ13127 1097 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 NNTQ13423 1086 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 STRIP1Q5VSL9 837 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 TTC39CQ8N584 583 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 SLC44A5Q8NCS7 719 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 SEPT1Q8WYJ6 367 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 USP44Q9H0E7 712 aa11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 H2AFY2Q9P0M6 372 aaPredicted RBP11.5□□□□□ -0.57
CACNA1C-210ENST00000399606 EFCAB6Q5THR3 1501 aa11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 SETD1BQ9UPS6 1966 aaKnown RBP11.49□□□□□ -0.57
CACNA1C-210ENST00000399606 PGRMC1O00264 195 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms