RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 VWA5AO00534 786 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 FAM58BPP0C7Q3 252 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ARPP19P56211 112 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 NR1D2Q14995 579 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CCDC157Q569K6 752 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CCDC81Q6ZN84 652 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 BNIPLQ7Z465 357 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 FBXL16Q8N461 479 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CCDC127Q96BQ5 260 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TEX12Q9BXU0 123 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 RANBP17Q9H2T7 1088 aaKnown RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TFCP2L1Q9NZI6 479 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 FRMPD2Q68DX3 1309 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ADGRA3Q8IWK6 1321 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 SH3D21A4FU49 640 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 POTECB2RU33 542 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ANTXR2P58335 489 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 VBP1P61758 197 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TRIP13Q15645 432 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 KYNUQ16719 465 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 KLHL38Q2WGJ6 581 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ZC2HC1CQ53FD0 456 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 NT5DC1Q5TFE4 455 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CCDC137Q6PK04 289 aaKnown RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 C11orf74Q86VG3 221 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 PYROXD1Q8WU10 500 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CASKIN2Q8WXE0 1202 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 C1orf50Q9BV19 199 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 KLHL4Q9C0H6 718 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 UBE2TQ9NPD8 197 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 DNAJC12Q9UKB3 198 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CDC42BPGQ6DT37 1551 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CIITAP33076 1130 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 GUCY1A2P33402 732 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 COASYQ13057 564 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 PABPC4Q13310 644 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ODR4Q5SWX8 454 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 GPATCH4Q5T3I0 446 aaKnown RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 MAEAQ7L5Y9 396 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 AKAP14Q86UN6 197 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ENKURQ8TC29 256 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ASB12Q8WXK4 309 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 AGXT2Q9BYV1 514 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CUEDC1Q9NWM3 386 aaPredicted RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 COPG2Q9UBF2 871 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 SMG5Q9UPR3 1016 aaKnown RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 BTBD3Q9Y2F9 522 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TTLL13PA6NNM8 815 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 O00370 1275 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 NDUFB5O43674 189 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TBC1D12O60347 775 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 POLR2BP30876 1174 aaKnown RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TP53BP2Q13625 1128 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 CAPRIN1Q14444 709 aaKnown RBP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 TAB1Q15750 504 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 SULT1C3Q6IMI6 304 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 C11orf88Q6PI97 169 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 KRT77Q7Z794 578 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 NSL1Q96IY1 281 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 VPS50Q96JG6 964 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ARHGEF10LQ9HCE6 1279 aa10.05□□□□□ -0.8
SMAD9-203ENST00000399275 ANGPT2O15123 496 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PHF2O75151 1096 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 LRRN2O75325 713 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ABCB1P08183 1280 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ALOX12P18054 663 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TNNI1P19237 187 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 GTF2H1P32780 548 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ALDH18A1P54886 795 aaKnown RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 HERVK_113P62684 666 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 GRM1Q13255 1194 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ALCAMQ13740 583 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 NAALADL2Q58DX5 795 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 OR2W6PQ8NHA6 318 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 MNTQ99583 582 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ASPSCR1Q9BZE9 553 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 POLD4Q9HCU8 107 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 SAYSD1Q9NPB0 183 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 CACNA2D2Q9NY47 1150 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 RPH3AQ9Y2J0 694 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PTPRMP28827 1452 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PNMA8CA0A1B0GUJ8 204 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 A0A1W2PQ72 361 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TNFAIP8O95379 198 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TOP3BO95985 862 aaKnown RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ALOX5P09917 674 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 MAPRE2Q15555 327 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TXNRD1Q16881 649 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 SMU1Q2TAY7 513 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TXNDC11Q6PKC3 985 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PNPLA7Q6ZV29 1317 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ZBTB8BQ8NAP8 495 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ARHGEF1Q92888 912 aaKnown RBP10.04□□□□□ -0.8
SMAD9-203ENST00000399275 ACCSQ96QU6 501 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 TRIM9Q9C026 710 aa10.04□□□□□ -0.8
SMAD9-203ENST00000399275 PPCSQ9HAB8 311 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms