RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 IFNB1P01574 187 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 MAGEA4P43358 317 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 DNAJC3Q13217 504 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 AGAP11Q8TF27 550 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 GRK7Q8WTQ7 553 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 TARS2Q9BW92 718 aaKnown RBP20.72■□□□□ 0.91
COL13A1-205ENST00000398978 NEU2Q9Y3R4 380 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 NUB1Q9Y5A7 615 aa20.72■□□□□ 0.91
COL13A1-205ENST00000398978 NQO1P15559 274 aaKnown RBP20.71■□□□□ 0.91
COL13A1-205ENST00000398978 GAD2Q05329 585 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 MYO1EQ12965 1108 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 NEDD9Q14511 834 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 RHOT1Q8IXI2 618 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 PGAP2Q9UHJ9 254 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 AGO2Q9UKV8 859 aaKnown RBP20.71■□□□□ 0.91
COL13A1-205ENST00000398978 COL2A1P02458 1487 aaPredicted RBP20.71■□□□□ 0.91
COL13A1-205ENST00000398978 F8VP50 259 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 CYP1A1P04798 512 aaPredicted RBP20.71■□□□□ 0.91
COL13A1-205ENST00000398978 ACO1P21399 889 aaKnown RBP20.71■□□□□ 0.91
COL13A1-205ENST00000398978 CDC25CP30307 473 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 SFNP31947 248 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 WDR4P57081 412 aaKnown RBP20.71■□□□□ 0.91
COL13A1-205ENST00000398978 NOMO3P69849 1222 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 CENPCQ03188 943 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 WLSQ5T9L3 541 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 MFSD7Q6UXD7 560 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 TMEM130Q8N3G9 435 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 CYP26B1Q9NR63 512 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 NKIRAS1Q9NYS0 192 aa20.71■□□□□ 0.91
COL13A1-205ENST00000398978 TTLL13PA6NNM8 815 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 TBC1D12O60347 775 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 C4BPAP04003 597 aaKnown RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 EZRP15311 586 aaKnown RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 SNRPFP62306 86 aaKnown RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 DYNLT1P63172 113 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 ZACNQ401N2 412 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 ANKLE1Q8NAG6 615 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 RBBP8NLQ8NC74 664 aaPredicted RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 SUPT20HQ8NEM7 779 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 IFT74Q96LB3 600 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 EXOC1LA0A1B0GW35 172 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 CUL2Q13617 745 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 SNRNP48Q6IEG0 339 aaKnown RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 USP37Q86T82 979 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 ANKMY2Q8IV38 441 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 SAMD3Q8N6K7 520 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 ZNF668Q96K58 619 aaPredicted RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 TACO1Q9BSH4 297 aaKnown RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 AVENQ9NQS1 362 aaPredicted RBP20.7■□□□□ 0.9
COL13A1-205ENST00000398978 IVNS1ABPQ9Y6Y0 642 aa20.7■□□□□ 0.9
COL13A1-205ENST00000398978 NOP14P78316 857 aaKnown RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 PLCB3Q01970 1234 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 FSTL1Q12841 308 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 GPS1Q13098 491 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 CRELD2Q6UXH1 353 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 C15orf39Q6ZRI6 1047 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ASAP3Q8TDY4 903 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 NTPCRQ9BSD7 190 aaKnown RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 C12orf65Q9H3J6 166 aaKnown RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 VPS37BQ9H9H4 285 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 GEMIN8Q9NWZ8 242 aaKnown RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 RBAKQ9NYW8 714 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 KIAA1217Q5T5P2 1943 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 GSTA1P08263 222 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 TAC1P20366 129 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 SLC1A1P43005 524 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ARSEP51690 589 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 PKN2Q16513 984 aaKnown RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 LIN9Q5TKA1 542 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 VSIG10LQ86VR7 867 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ECHDC2Q86YB7 292 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 SPIRE2Q8WWL2 714 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 TIPINQ9BVW5 301 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 VWA5AO00534 786 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 EXTL3O43909 919 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ZBED4O75132 1171 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 KRT1P04264 644 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 PECAM1P16284 738 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 KCNA2P16389 499 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 POLGP54098 1239 aaPredicted RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ACTR2P61160 394 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 COPS2P61201 443 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 NFX1Q12986 1120 aaKnown RBP20.69■□□□□ 0.9
COL13A1-205ENST00000398978 CYP4A22Q5TCH4 519 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ABRAQ8N0Z2 381 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 MCEEQ96PE7 176 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 PITPNM3Q9BZ71 974 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ATP6V0A4Q9HBG4 840 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 FBXO40Q9UH90 709 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 ARL2BPQ9Y2Y0 163 aa20.69■□□□□ 0.9
COL13A1-205ENST00000398978 CDH16O75309 829 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 ATP5DP30049 168 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 SP2Q02086 613 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 CXCL9Q07325 125 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 CCNG2Q16589 344 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 SYCP2LQ5T4T6 812 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 ZBTB33Q86T24 672 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 CCDC89Q8N998 374 aa20.68■□□□□ 0.9
COL13A1-205ENST00000398978 FLAD1Q8NFF5 587 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms