RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 DKC1O60832 514 aaKnown RBP eCLIP27.14■■□□□ 1.94
COL13A1-203ENST00000398969 CDH16O75309 829 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 NR3C2P08235 984 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 KCNA2P16389 499 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 NOMO3P69849 1222 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 GALNTL6Q49A17 601 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 TBC1D1Q86TI0 1168 aaPredicted RBP27.14■■□□□ 1.94
COL13A1-203ENST00000398969 GGA3Q9NZ52 723 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 TBK1Q9UHD2 729 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 FZD1Q9UP38 647 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 RIPK3Q9Y572 518 aa27.14■■□□□ 1.94
COL13A1-203ENST00000398969 PTPRJQ12913 1337 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 VNN1O95497 513 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 SLC8A1P32418 973 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 HIRAP54198 1017 aaPredicted RBP27.14■■□□□ 1.93
COL13A1-203ENST00000398969 NLRP11P59045 1033 aaKnown RBP27.14■■□□□ 1.93
COL13A1-203ENST00000398969 TRIM72Q6ZMU5 477 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 ABRAQ8N0Z2 381 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 RPAP3Q9H6T3 665 aaPredicted RBP27.14■■□□□ 1.93
COL13A1-203ENST00000398969 NOD2Q9HC29 1040 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 SPON1Q9HCB6 807 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 MRPL47Q9HD33 250 aaKnown RBP27.14■■□□□ 1.93
COL13A1-203ENST00000398969 CYP26B1Q9NR63 512 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 RNF146Q9NTX7 359 aa27.14■■□□□ 1.93
COL13A1-203ENST00000398969 PSAPP07602 524 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 CD58P19256 250 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 KLRC2P26717 231 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 CUL2Q13617 745 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 SPATA21Q7Z572 469 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 EXD1Q8NHP7 514 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 TCP11Q8WWU5 503 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 C9orf72Q96LT7 481 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 TACO1Q9BSH4 297 aaKnown RBP27.13■■□□□ 1.93
COL13A1-203ENST00000398969 MCM8Q9UJA3 840 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 MAFGO15525 162 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 GJB6O95452 261 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 PTPRAP18433 802 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 BACE1P56817 501 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 NCALDP61601 193 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 PRKCEQ02156 737 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 PLEKHA7Q6IQ23 1121 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 WNK4Q96J92 1243 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 VCPIP1Q96JH7 1222 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 APOBEC3GQ9HC16 384 aaKnown RBP27.13■■□□□ 1.93
COL13A1-203ENST00000398969 EURLQ9NYK6 297 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 USTQ9Y2C2 406 aa27.13■■□□□ 1.93
COL13A1-203ENST00000398969 H0YCG3 227 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 VWA5AO00534 786 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 GJC1P36383 396 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 ACOT2P49753 483 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 IRX3P78415 501 aaPredicted RBP27.12■■□□□ 1.93
COL13A1-203ENST00000398969 NEDD9Q14511 834 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 STAT4Q14765 748 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 PRUNE1Q86TP1 453 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 PHF13Q86YI8 300 aaPredicted RBP27.12■■□□□ 1.93
COL13A1-203ENST00000398969 CCDC60Q8IWA6 550 aaPredicted RBP27.12■■□□□ 1.93
COL13A1-203ENST00000398969 SRRM1Q8IYB3 904 aaKnown RBP27.12■■□□□ 1.93
COL13A1-203ENST00000398969 TGS1Q96RS0 853 aaKnown RBP27.12■■□□□ 1.93
COL13A1-203ENST00000398969 PICK1Q9NRD5 415 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 ARL2BPQ9Y2Y0 163 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 PCDHB4Q9Y5E5 795 aa27.12■■□□□ 1.93
COL13A1-203ENST00000398969 RGS20O76081 388 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 GNA15P30679 374 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 SSTR3P32745 418 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-203ENST00000398969 STX2P32856 288 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 TMEM270Q6UE05 265 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 ARHGEF18Q6ZSZ5 1173 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 ATG4CQ96DT6 458 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 CCDC77Q9BR77 488 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 AS3MTQ9HBK9 375 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 BAIAP2L1Q9UHR4 511 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 CLTAP09496 248 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 SP4Q02446 784 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 MKRN3Q13064 507 aaKnown RBP27.11■■□□□ 1.93
COL13A1-203ENST00000398969 RIPK1Q13546 671 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 ZKSCAN8Q15776 578 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-203ENST00000398969 SEPT14Q6ZU15 432 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 RPAINQ86UA6 219 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 GBP7Q8N8V2 638 aaPredicted RBP27.11■■□□□ 1.93
COL13A1-203ENST00000398969 ZNF280CQ8ND82 737 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 MAGEB18Q96M61 343 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 PRKAG3Q9UGI9 489 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 AGO2Q9UKV8 859 aaKnown RBP27.11■■□□□ 1.93
COL13A1-203ENST00000398969 ACTL7BQ9Y614 415 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 STYXL1Q9Y6J8 313 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 SCINQ9Y6U3 715 aa27.11■■□□□ 1.93
COL13A1-203ENST00000398969 TLR3O15455 904 aaKnown RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 SSR1P43307 286 aaKnown RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 E2F5Q15329 346 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 P3H1Q32P28 736 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 TMEM63BQ5T3F8 832 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 CRELD2Q6UXH1 353 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 GSTA5Q7RTV2 222 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 PNMA8AQ86V59 439 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 ZCCHC9Q8N567 271 aaKnown RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 ECT2Q9H8V3 914 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 JPH1Q9HDC5 661 aaPredicted RBP27.1■■□□□ 1.93
COL13A1-203ENST00000398969 NKIRAS1Q9NYS0 192 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 POTEJP0CG39 1038 aa27.1■■□□□ 1.93
COL13A1-203ENST00000398969 ABCD1P33897 745 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms