RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 CAB39Q9Y376 341 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 RGS12O14924 1447 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 AKAP10O43572 662 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 TRIM16O95361 564 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PYGLP06737 847 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ENO3P13929 434 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 IFNAR1P17181 557 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PRKCEQ02156 737 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PLOD1Q02809 727 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 IER5Q5VY09 327 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PLEKHM3Q6ZWE6 761 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 HAUS6Q7Z4H7 955 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 COL23A1Q86Y22 540 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 PDIK1LQ8N165 341 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 TMEM35BQ8NCS4 154 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 IPMKQ8NFU5 416 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ELMO2Q96JJ3 720 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 FAM167AQ96KS9 214 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 CHCHD3Q9NX63 227 aaKnown RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 SUN2Q9UH99 717 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 MFAP3LO75121 409 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 SMNDC1O75940 238 aaKnown RBP eCLIP9.8□□□□□ -0.84
ATL3-201ENST00000398868 MZF1P28698 734 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 CTCFP49711 727 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 GTF2H3Q13889 308 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 NBPF12Q5TAG4 269 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 HDDC2Q7Z4H3 204 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 RNF180Q86T96 592 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 OSBPL9Q96SU4 736 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 TBC1D22BQ9NU19 505 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 MAP3K4Q9Y6R4 1608 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 CYP2C8P10632 490 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 TAC1P20366 129 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 CCNE1P24864 410 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 VSNL1P62760 191 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PANX2Q96RD6 677 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 OSBPL5Q9H0X9 879 aaPredicted RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 CNGB3Q9NQW8 809 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ABHD10Q9NUJ1 306 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PPIEQ9UNP9 301 aaKnown RBP9.8□□□□□ -0.84
ATL3-201ENST00000398868 ATP5HO75947 161 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 GH1P01241 217 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ARHGEF7Q14155 803 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 LY6KQ17RY6 165 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PKN3Q6P5Z2 889 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 EMBQ6PCB8 327 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ISLR2Q6UXK2 745 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 PNMA5Q96PV4 448 aa9.8□□□□□ -0.84
ATL3-201ENST00000398868 ITGB3P05106 788 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 DHX38Q92620 1227 aaKnown RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 PRMT6Q96LA8 375 aaPredicted RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 CIPCQ9C0C6 399 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 MFSD1Q9H3U5 465 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 GOLPH3Q9H4A6 298 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 MYO1GB0I1T2 1018 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 CHN1P15882 459 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 ITGB6P18564 788 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 CLCN3P51790 818 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 KRT76Q01546 638 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 RESTQ13127 1097 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 LONRF1Q17RB8 773 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 GOLGA7BQ2TAP0 167 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 FAXCQ5TGI0 409 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.79□□□□□ -0.84
ATL3-201ENST00000398868 DNAAF5Q86Y56 855 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 ATP6V1G3Q96LB4 118 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 IRX2Q9BZI1 471 aaPredicted RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 PRR12Q9ULL5 1215 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 TEX33O43247 280 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 SH3BGRLO75368 114 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 HIC1Q14526 733 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 DGKDQ16760 1214 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 ACER1Q8TDN7 264 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 JADE3Q92613 823 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 PPP2R3CQ969Q6 453 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 GBA2Q9HCG7 927 aaPredicted RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 USE1Q9NZ43 259 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 SREBF2Q12772 1141 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 NMD3Q96D46 503 aaKnown RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 VPS39Q96JC1 886 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 GLT1D1Q96MS3 346 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 ZBTB18Q99592 522 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 BARHL2Q9NY43 387 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.79□□□□□ -0.842e-6■□□□□ 9.5
ATL3-201ENST00000398868 B3GAT3O94766 335 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 CDC25CP30307 473 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 CDK17Q00537 523 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 RASGRP2Q7LDG7 609 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 CLEC4FQ8N1N0 589 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 TRIM8Q9BZR9 551 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 SMPD4Q9NXE4 827 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 LSM7Q9UK45 103 aaKnown RBP9.79□□□□□ -0.84
ATL3-201ENST00000398868 PKP3Q9Y446 797 aa9.79□□□□□ -0.84
ATL3-201ENST00000398868 P4HA2O15460 535 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 CSF1RP07333 972 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 GPC5P78333 572 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
ATL3-201ENST00000398868 DGKZQ13574 1117 aa9.78□□□□□ -0.84
ATL3-201ENST00000398868 GLB1LQ6UWU2 654 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms