RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 LRRC4Q9HBW1 653 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 ARHGEF3Q9NR81 526 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 RNF146Q9NTX7 359 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 TYW1Q9NV66 732 aaKnown RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 PHTF1Q9UMS5 762 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 LRRC42Q9Y546 428 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 MST1RQ04912 1400 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 PITPNM2Q9BZ72 1349 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 EXOC1LA0A1B0GW35 172 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 F5H423 210 aaPredicted RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 H3BRJ5 948 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 DDHD2O94830 711 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 NTSR2O95665 410 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 ENO1P06733 434 aaKnown RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 OCM2P0CE71 109 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 OCMP0CE72 109 aaPredicted RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 PTPN4P29074 926 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 COASYQ13057 564 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 RAPH1Q70E73 1250 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 DDHD1Q8NEL9 900 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 RNF25Q96BH1 459 aaPredicted RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 MTBPQ96DY7 904 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 HSPBAP1Q96EW2 488 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 CDHR1Q96JP9 859 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 TUBB6Q9BUF5 446 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 TRIM55Q9BYV6 548 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 PAIP1Q9H074 479 aaKnown RBP9.81□□□□□ -0.84
CDH23-203ENST00000398788 CYP4F11Q9HBI6 524 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 SLC38A10Q9HBR0 1119 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 PCDH18Q9HCL0 1135 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 NDUFA13Q9P0J0 144 aa9.81□□□□□ -0.84
CDH23-203ENST00000398788 B2RBV5 119 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PEX11AO75192 247 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 NAT1P18440 290 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PBX1P40424 430 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 ECE1P42892 770 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 ARFIP2P53365 341 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 KHDC1Q4VXA5 237 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 KIAA1755Q5JYT7 1200 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 STRIP1Q5VSL9 837 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PDXDC1Q6P996 788 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 DARS2Q6PI48 645 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 UTS2BQ765I0 119 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 SGMS1Q86VZ5 419 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 OR6B3Q8NGW1 331 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 MAML3Q96JK9 1138 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 NUF2Q9BZD4 464 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 BARHL2Q9NY43 387 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PCSK1NQ9UHG2 260 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 APPL1Q9UKG1 709 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 DENND3A2RUS2 1198 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 CLDN3O15551 220 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 GRIN3BO60391 1043 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PSMG1O95456 288 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 MDM2Q00987 491 aaPredicted RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 CNGA2Q16280 664 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 TMEM270Q6UE05 265 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 DNAJC14Q6Y2X3 702 aaPredicted RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 GET4Q7L5D6 327 aaPredicted RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 CATSPER4Q7RTX7 472 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 COL23A1Q86Y22 540 aaPredicted RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 APOBEC3FQ8IUX4 373 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 GLYCTKQ8IVS8 523 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 C4orf33Q8N1A6 199 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 CENPTQ96BT3 561 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 DCUN1D5Q9BTE7 237 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 AP5M1Q9H0R1 490 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 SNX25Q9H3E2 840 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 CNOT7Q9UIV1 285 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 ARIH1Q9Y4X5 557 aaPredicted RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 GOLGA8MH3BSY2 632 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 MAP3K13O43283 966 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 GPC4O75487 556 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PSAPP07602 524 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 CCND2P30279 289 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 C12orf60Q5U649 245 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 NLRP9Q7RTR0 991 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 SATL1Q86VE3 508 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 XXYLT1Q8NBI6 393 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.8□□□□□ -0.84
CDH23-203ENST00000398788 KCTD6Q8NC69 237 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 RBM46Q8TBY0 533 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 ANKS1AQ92625 1134 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 PPP2R3CQ969Q6 453 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 CNBD2Q96M20 576 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 MMTAG2Q9BU76 263 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 PACSIN1Q9BY11 444 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 STK33Q9BYT3 514 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 CCDC68Q9H2F9 335 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 GABBR1Q9UBS5 961 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 TRIM17Q9Y577 477 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 ZNF609O15014 1411 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 NMT1P30419 496 aaKnown RBP9.8□□□□□ -0.84
CDH23-203ENST00000398788 CNGA3Q16281 694 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 ZBTB46Q86UZ6 589 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 IGDCC4Q8TDY8 1250 aa9.8□□□□□ -0.84
CDH23-203ENST00000398788 ZNF333Q96JL9 665 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms