RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 FBXL21Q9UKT6 434 aa14.56□□□□□ -0.08
VCX3A-202ENST00000398729 AGO2Q9UKV8 859 aaKnown RBP14.56□□□□□ -0.08
VCX3A-202ENST00000398729 PCDHB8Q9UN66 801 aa14.56□□□□□ -0.08
VCX3A-202ENST00000398729 EXOC7Q9UPT5 735 aa14.56□□□□□ -0.08
VCX3A-202ENST00000398729 STYXL1Q9Y6J8 313 aa14.56□□□□□ -0.08
VCX3A-202ENST00000398729 ACACBO00763 2458 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 DOCK8Q8NF50 2099 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 MED19A0JLT2 244 aaPredicted RBP14.55□□□□□ -0.08
VCX3A-202ENST00000398729 WDR27A2RRH5 827 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 TISP43B9A030 160 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 M0QZQ0 153 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 PRRG1O14668 218 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ABLIM3O94929 683 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 GCNT3O95395 438 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 LRG1P02750 347 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ZSCAN22P10073 491 aaPredicted RBP14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ATF2P15336 505 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 NTHL1P78549 312 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ALCAMQ13740 583 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 TMEM132DQ14C87 1099 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 SPATA1Q5VX52 437 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 TPGS2Q68CL5 300 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 JADE1Q6IE81 842 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 SLC44A3Q8N4M1 653 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 POMGNT1Q8WZA1 660 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ACCSQ96QU6 501 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 STRA6Q9BX79 667 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 LRRC27Q9C0I9 530 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ASB7Q9H672 318 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 PANK4Q9NVE7 773 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 DERAQ9Y315 318 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 PCDHB13Q9Y5F0 798 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 R4GN57 208 aa14.55□□□□□ -0.08
VCX3A-202ENST00000398729 ARHGEF37A1IGU5 675 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 FRMD3A2A2Y4 597 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 CUTAO60888 179 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 F13A1P00488 732 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 LMNAP02545 664 aaKnown RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 CFHP08603 1231 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 NFICP08651 508 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 PAX3P23760 479 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 AARSP49588 968 aaKnown RBP eCLIP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 GUCY2FP51841 1108 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 POU5F1Q01860 360 aaKnown RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 YWHAHQ04917 246 aaPredicted RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 PABPC1LQ4VXU2 614 aaKnown RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 L1TD1Q5T7N2 865 aaKnown RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 DSTYKQ6XUX3 929 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 USP37Q86T82 979 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 CCDC65Q8IXS2 484 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 SYCP3Q8IZU3 236 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 TMEM130Q8N3G9 435 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 OXCT2Q9BYC2 517 aaPredicted RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 TNMDQ9H2S6 317 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 CUEDC2Q9H467 287 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 CYP4F11Q9HBI6 524 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 DLGAP2Q9P1A6 1054 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 DNMT3BQ9UBC3 853 aaKnown RBP14.54□□□□□ -0.08
VCX3A-202ENST00000398729 CDH7Q9ULB5 785 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 KCNH3Q9ULD8 1083 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 MAFFQ9ULX9 164 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 C2CD2Q9Y426 696 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 DOCK6Q96HP0 2047 aa14.54□□□□□ -0.08
VCX3A-202ENST00000398729 ANHXE9PGG2 379 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 OAZ2O95190 189 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 SRFP11831 508 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 CPB1P15086 417 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 ADSSP30520 456 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 AMPD3Q01432 767 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 KCNA1Q09470 495 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 FOXD4L6Q3SYB3 417 aaPredicted RBP14.53□□□□□ -0.08
VCX3A-202ENST00000398729 FOXD4L3Q6VB84 417 aaPredicted RBP14.53□□□□□ -0.08
VCX3A-202ENST00000398729 TCEAL8Q8IYN2 117 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 KIAA2013Q8IYS2 634 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 KCNG4Q8TDN1 519 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 FGF13Q92913 245 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 IKZF4Q9H2S9 585 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 SEMA4AQ9H3S1 761 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 HCFC1R1Q9NWW0 138 aa14.53□□□□□ -0.08
VCX3A-202ENST00000398729 AFF4Q9UHB7 1163 aaKnown RBP14.53□□□□□ -0.08
VCX3A-202ENST00000398729 TIMM13Q9Y5L4 95 aaPredicted RBP14.53□□□□□ -0.08
VCX3A-202ENST00000398729 ANK1P16157 1881 aa14.52□□□□□ -0.08
VCX3A-202ENST00000398729 KMT2BQ9UMN6 2715 aaPredicted RBP14.52□□□□□ -0.08
VCX3A-202ENST00000398729 STK25O00506 426 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 IL18RAPO95256 599 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 ODC1P11926 461 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 PTPN2P17706 415 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 TYMPP19971 482 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 CASP5P51878 434 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 LILRA4P59901 499 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 ADCY1Q08828 1119 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 HTR4Q13639 388 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 E2F4Q16254 413 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 C9orf57Q5W0N0 161 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 ATL3Q6DD88 541 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 STXBP4Q6ZWJ1 553 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 MTSS1LQ765P7 747 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 IQUBQ8NA54 791 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 SPRYD3Q8NCJ5 442 aa14.52□□□□□ -0.09
VCX3A-202ENST00000398729 ITFG1Q8TB96 612 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms