RNA–Protein interactions for RNA: ENST00000398427.6

PPME1-202, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best) BASIC

Gene PPME1, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-202ENST00000398427 TRAPPC11Q7Z392 1133 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 ZNF280BQ86YH2 543 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 HERC6Q8IVU3 1022 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 DPP3Q9NY33 737 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 SIX4Q9UIU6 781 aa12.31□□□□□ -0.44
PPME1-202ENST00000398427 LGALS16A8MUM7 142 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 STX10O60499 249 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 VNN1O95497 513 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 TNNC2P02585 160 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 ITGB3P05106 788 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 AP3M2P53677 418 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 HTRA4P83105 476 aaPredicted RBP12.3□□□□□ -0.44
PPME1-202ENST00000398427 MYL7Q01449 175 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 MLLT1Q03111 559 aaPredicted RBP12.3□□□□□ -0.44
PPME1-202ENST00000398427 BIRC3Q13489 604 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 KRT39Q6A163 491 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 FAM109BQ6ICB4 259 aaPredicted RBP12.3□□□□□ -0.44
PPME1-202ENST00000398427 BEST2Q8NFU1 509 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 PHOSPHO2Q8TCD6 241 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 TAS1R2Q8TE23 839 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 SLC38A7Q9NVC3 462 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 IFNKQ9P0W0 207 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 KANSL3Q9P2N6 904 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 SCN1AP35498 2009 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 CDH23Q9H251 3354 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 CASTOR2A6NHX0 329 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 PPEF2O14830 753 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 TEX33O43247 280 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 LRRN2O75325 713 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 SASH3O75995 380 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 IVLP07476 585 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 CYP3A5P20815 502 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 UBASH3AP57075 661 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 DSC1Q08554 894 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 PTPN21Q16825 1174 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 SARM1Q6SZW1 724 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 LRRC43Q8N309 656 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 YME1L1Q96TA2 773 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 MRPL9Q9BYD2 267 aaKnown RBP12.3□□□□□ -0.44
PPME1-202ENST00000398427 DNAJB4Q9UDY4 337 aa12.3□□□□□ -0.44
PPME1-202ENST00000398427 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 N4BP1O75113 896 aaKnown RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 CST3P01034 146 aaPredicted RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 IGFBP6P24592 240 aaPredicted RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 LMAN1P49257 510 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 CORO7P57737 925 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 RNASELQ05823 741 aaKnown RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 TUSC3Q13454 348 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 SMC1AQ14683 1233 aaKnown RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 RSPH1Q8WYR4 309 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 SEMA4DQ92854 862 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 XPO4Q9C0E2 1151 aaKnown RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 ADAM21Q9UKJ8 722 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 ITGA11Q9UKX5 1188 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 COQ4Q9Y3A0 265 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 SH3BP1Q9Y3L3 701 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 ANO9A1A5B4 782 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 PPP1R12AO14974 1030 aaPredicted RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 PMM2O15305 246 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 HLA-DRAP01903 254 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 KRT19P08727 400 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 LRPAP1P30533 357 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 POLR2BP30876 1174 aaKnown RBP12.29□□□□□ -0.44
PPME1-202ENST00000398427 CLCNKBP51801 687 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 NR1I3Q14994 352 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 EPC2Q52LR7 807 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 COLGALT2Q8IYK4 626 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 FBXL13Q8NEE6 735 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 RABGGTAQ92696 567 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 ELMO3Q96BJ8 720 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 CRACR2AQ9BSW2 395 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
PPME1-202ENST00000398427 CHD7Q9P2D1 2997 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 GRXCR1A8MXD5 290 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 P4HA2O15460 535 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 PHACTR2O75167 634 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 SEC31AO94979 1220 aaKnown RBP12.28□□□□□ -0.44
PPME1-202ENST00000398427 BMP8BP34820 402 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 PIK3CAP42336 1068 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 UBXN1Q04323 297 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 KCNMA1Q12791 1236 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 NCOA4Q13772 614 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 BTG3Q14201 252 aaPredicted RBP12.28□□□□□ -0.44
PPME1-202ENST00000398427 FILIP1LQ4L180 1135 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 C9orf57Q5W0N0 161 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 FOXR1Q6PIV2 292 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 CMTR2Q8IYT2 770 aaKnown RBP12.28□□□□□ -0.44
PPME1-202ENST00000398427 C3orf58Q8NDZ4 430 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 LMO3Q8TAP4 145 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 TRIM5Q9C035 493 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 CWH43Q9H720 699 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 AGAP1Q9UPQ3 857 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 CHD9Q3L8U1 2897 aa12.28□□□□□ -0.44
PPME1-202ENST00000398427 GTPBP10A4D1E9 387 aaKnown RBP12.28□□□□□ -0.44
PPME1-202ENST00000398427 LCHNA4D1U4 455 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms