RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 HSD17B12Q53GQ0 312 aa13.4□□□□□ -0.26
CCBE1-201ENST00000398179 SPOPLQ6IQ16 392 aa13.4□□□□□ -0.26
CCBE1-201ENST00000398179 MAFIPQ8WZ33 124 aa13.4□□□□□ -0.26
CCBE1-201ENST00000398179 CORO1BQ9BR76 489 aa13.4□□□□□ -0.26
CCBE1-201ENST00000398179 TNNQ9UQP3 1299 aa13.4□□□□□ -0.26
CCBE1-201ENST00000398179 KPNA7A9QM74 516 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 GHRP10912 638 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 IL1R1P14778 569 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 CUL2Q13617 745 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 SGSM1Q2NKQ1 1148 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 EMBQ6PCB8 327 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 ULK3Q6PHR2 472 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 ZNF496Q96IT1 587 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 TCF7L2Q9NQB0 619 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 ECE2O60344 883 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 VARSP26640 1264 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 ZCCHC7Q8N3Z6 543 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 TRIM43Q96BQ3 446 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 OLA1Q9NTK5 396 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 TRNAU1APQ9NX07 287 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 IL20Q9NYY1 176 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 HMGXB4Q9UGU5 601 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 HFM1A2PYH4 1435 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 SYNJ1O43426 1573 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 PRDM2Q13029 1718 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 F8W8V4 182 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 PIK3CDO00329 1044 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 NCAM1P13591 858 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 MAT2AP31153 395 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 GALK2Q01415 458 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 RBBP8NLQ8NC74 664 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 TRPV3Q8NET8 790 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 RBBP8Q99708 897 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 HNRNPABQ99729 332 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 MMTAG2Q9BU76 263 aaKnown RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 MTMR4Q9NYA4 1195 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 BAG5Q9UL15 447 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 SOX6P35712 828 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 WDR49Q8IV35 697 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 LRRC8AQ8IWT6 810 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 PNMA1Q8ND90 353 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 MAGED4Q96JG8 741 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 TAS2R1Q9NYW7 299 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 PPIL2Q13356 520 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 MAPK6Q16659 721 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 PITRM1Q5JRX3 1037 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 TTC23LQ6PF05 361 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 PYDC1Q8WXC3 89 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 CDCA7Q9BWT1 371 aaPredicted RBP13.39□□□□□ -0.27
CCBE1-201ENST00000398179 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 ZFP69BQ9UJL9 534 aa13.39□□□□□ -0.27
CCBE1-201ENST00000398179 RTEL1-TNFRSF6BF6WH68 1400 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 TLR3O15455 904 aaKnown RBP13.38□□□□□ -0.27
CCBE1-201ENST00000398179 HUS1O60921 280 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CPA1P15085 419 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CASP4P49662 377 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 RNF4P78317 190 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 GALNT3Q14435 633 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 ALG1LQ6GMV1 187 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 DPF1Q92782 380 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 RADILQ96JH8 1075 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 MEIS3Q99687 375 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 H0YJX3 145 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CTIFO43310 598 aaKnown RBP13.38□□□□□ -0.27
CCBE1-201ENST00000398179 RIPK2O43353 540 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 BCL10O95999 233 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 SRGAP2CP0DJJ0 459 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 PRKCEQ02156 737 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 PLCL1Q15111 1095 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 ERMARDQ5T6L9 678 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 SSX9Q7RTT3 188 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 LMBRD1Q9NUN5 540 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 PNMA8CA0A1B0GUJ8 204 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 SMCO3A2RU48 225 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 K7ENM7 598 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 RAB3DO95716 219 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 ANXA6P08133 673 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 STAT3P40763 770 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 RAB12Q6IQ22 244 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 SWSAP1Q6NVH7 229 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CABP7Q86V35 215 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 OR5J2Q8NH18 312 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 EXD1Q8NHP7 514 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 ITPKCQ96DU7 683 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CENPOQ9BU64 300 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 INTS13Q9NVM9 706 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 PCDHGA8Q9Y5G5 932 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 TOPBP1Q92547 1522 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 FAM13AO94988 1023 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 CLK1P49759 484 aaKnown RBP13.38□□□□□ -0.27
CCBE1-201ENST00000398179 USP46P62068 366 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 PDE4DQ08499 809 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 SYCE2Q6PIF2 218 aa13.38□□□□□ -0.27
CCBE1-201ENST00000398179 ZNF717Q9BY31 904 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms