RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 NME2P22392 152 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 MSX1P28360 303 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 HTR3AP46098 478 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 ELAVL2Q12926 359 aaKnown RBP4.15□□□□□ -1.75
UBE3A-202ENST00000397954 STK3Q13188 491 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 PCBP2Q15366 365 aaKnown RBP eCLIP4.15□□□□□ -1.751e-7■■■□□ 17.9
UBE3A-202ENST00000397954 CALCRLQ16602 461 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 FBXO47Q5MNV8 452 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 LIAT1Q6ZQX7 453 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 IGSF22Q8N9C0 903 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 DIS3LQ8TF46 1054 aaKnown RBP4.15□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF689Q96CS4 500 aaPredicted RBP4.15□□□□□ -1.75
UBE3A-202ENST00000397954 TGS1Q96RS0 853 aaKnown RBP4.15□□□□□ -1.75
UBE3A-202ENST00000397954 CCSER1Q9C0I3 900 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 DNAI2Q9GZS0 605 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 TMEM117Q9H0C3 514 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 ATP6V0A4Q9HBG4 840 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 ERVK-5Q9HDB9 667 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 TPCN1Q9ULQ1 816 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 PCDHGB3Q9Y5G1 929 aa4.15□□□□□ -1.75
UBE3A-202ENST00000397954 ADGRA3Q8IWK6 1321 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SLC22A31A6NKX4 558 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SMIM22K7EJ46 135 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 MSH4O15457 936 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PRODHO43272 600 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ADCY6O43306 1168 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 BRINP1O60477 761 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 YEATS4O95619 227 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PIGRP01833 764 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ITGAVP06756 1048 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ASGR2P07307 311 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 TIMP2P16035 220 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 NAMPTP43490 491 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ATP2C1P98194 919 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SLC7A5Q01650 507 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ZNF252P-AS1Q0IIN9 211 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SMARCB1Q12824 385 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 MYBPC2Q14324 1141 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 BECN1Q14457 450 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SF1Q15637 639 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 LY6KQ17RY6 165 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 WIPI1Q5MNZ9 446 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GDF6Q6KF10 455 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 C1orf228Q6PIY5 440 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CCDC73Q6ZRK6 1079 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CYFIP1Q7L576 1253 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 HERC6Q8IVU3 1022 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 LRRC43Q8N309 656 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 NXPE1Q8N323 547 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 C1orf131Q8NDD1 294 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 LMBR1Q8WVP7 490 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 USP7Q93009 1102 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 TOP1MTQ969P6 601 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 POP1Q99575 1024 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 AARSD1Q9BTE6 412 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 MRPL4Q9BYD3 311 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 WNT8AQ9H1J5 351 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 VAT1LQ9HCJ6 419 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SUSD2Q9UGT4 822 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 IRAK3Q9Y616 596 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GPC6Q9Y625 555 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ZFP37Q9Y6Q3 630 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 KIF26AQ9ULI4 1882 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 TRIP12Q14669 1992 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PDE2AO00408 941 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 XPOTO43592 962 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 KIF20AO95235 890 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GJB5O95377 273 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PYGMP11217 842 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CYP2C9P11712 490 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PABPC1P11940 636 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CYP3A5P20815 502 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 RNF144AP50876 292 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 WDR5P61964 334 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SPIRE1Q08AE8 756 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GRB10Q13322 594 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SURF1Q15526 300 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ARHGAP29Q52LW3 1261 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ZC3H12BQ5HYM0 836 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 KRT40Q6A162 431 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CXorf57Q6NSI4 855 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CXCL17Q6UXB2 119 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 NYAP1Q6ZVC0 841 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 SLC24A5Q71RS6 500 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ZBTB8OSQ8IWT0 167 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CRIPAKQ8N1N5 446 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CMASQ8NFW8 434 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PSPC1Q8WXF1 523 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GLG1Q92896 1179 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 BADQ92934 168 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CLIP3Q96DZ5 547 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PRRX2Q99811 253 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 ELAC2Q9BQ52 826 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 NTPCRQ9BSD7 190 aaKnown RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 CLEC4MQ9H2X3 399 aaPredicted RBP4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PLEKHA5Q9HAU0 1116 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 INCENPQ9NQS7 918 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 PDGFCQ9NRA1 345 aa4.14□□□□□ -1.75
UBE3A-202ENST00000397954 GMIPQ9P107 970 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms