RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ZNF333Q96JL9 665 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 FAM118BQ9BPY3 351 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 TOPORSQ9NS56 1045 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 ATXN10Q9UBB4 475 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 ANAPC7Q9UJX3 599 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 RPL26L1Q9UNX3 145 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 FSCN2O14926 492 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 PENKP01210 267 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 MFAP3P55082 362 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 PABPC1LQ4VXU2 614 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 DAB2IPQ5VWQ8 1189 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 RHBDF2Q6PJF5 856 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 PHC3Q8NDX5 983 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 UCMAQ8WVF2 138 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 CKAP2Q8WWK9 683 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 TIPINQ9BVW5 301 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 VCX3BQ9H321 246 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 EHMT1Q9H9B1 1298 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 VCX3AQ9NNX9 186 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 DNAAF2Q9NVR5 837 aaKnown RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 UVRAGQ9P2Y5 699 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 PCDHGA4Q9Y5G9 962 aa16.94■□□□□ 0.3
CHMP1A-201ENST00000397901 MROH7Q68CQ1 1323 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 TTC4O95801 387 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 PLS3P13797 630 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 GM2AP17900 193 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 ITGB5P18084 799 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 MAPK4P31152 587 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 PEX3P56589 373 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 CDR2Q01850 454 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 ARHGAP18Q8N392 663 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 FBXO41Q8TF61 875 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 NDNQ99608 321 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 ZHX2Q9Y6X8 837 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 CETPP11597 493 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 SKIP12755 728 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 ITIH2P19823 946 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 VHLP40337 213 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 MGAT5Q09328 741 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 MYBPC3Q14896 1274 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 C2CD6Q53TS8 623 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 LLGL2Q6P1M3 1020 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 RSBN1LQ6PCB5 846 aaPredicted RBP16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 GRAMD1AQ96CP6 724 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 FAM84AQ96KN4 292 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 TGS1Q96RS0 853 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 DCLRE1BQ9H816 532 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 STOML1Q9UBI4 398 aa16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 R3HDM2Q9Y2K5 976 aaKnown RBP16.93■□□□□ 0.3
CHMP1A-201ENST00000397901 KRT5P13647 590 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ATF2P15336 505 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 IVDP26440 423 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 TPP2P29144 1249 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ATP5DP30049 168 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 STX2P32856 288 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ADCY8P40145 1251 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 RARRES1P49788 294 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 SNRNP35Q16560 246 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 DPY19L2Q6NUT2 758 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 LCA5Q86VQ0 697 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ECHDC2Q86YB7 292 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 SRRM1Q8IYB3 904 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ANKLE1Q8NAG6 615 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 PTPRN2Q92932 1015 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 GBP5Q96PP8 586 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 GMLQ99445 158 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 MXRA8Q9BRK3 442 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 KIFC3Q9BVG8 833 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 HEMGNQ9BXL5 484 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 NINJ2Q9NZG7 142 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 PDP2Q9P2J9 529 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 HERC5Q9UII4 1024 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 BLOC1S6Q9UL45 172 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 COL4A5P29400 1685 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 GSTT1P30711 240 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 CACNA2D1P54289 1103 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ACAD10Q6JQN1 1059 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 C12orf56Q8IXR9 622 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 HELQQ8TDG4 1101 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 TAS1R2Q8TE23 839 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 PLVAPQ9BX97 442 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 PDGFDQ9GZP0 370 aaPredicted RBP16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.92■□□□□ 0.38e-18■■■■■ 88.3
CHMP1A-201ENST00000397901 FBXO28Q9NVF7 368 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 NMRK1Q9NWW6 199 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 ANAPC5Q9UJX4 755 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 TMCO1Q9UM00 188 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 SYNPO2Q9UMS6 1093 aa16.92■□□□□ 0.3
CHMP1A-201ENST00000397901 MAGEA13PA6NCF6 341 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 SMAPO00193 183 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 ALCAMQ13740 583 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 RCN2Q14257 317 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 SETDB1Q15047 1291 aa16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 ACBD5Q5T8D3 534 aaPredicted RBP16.91■□□□□ 0.3
CHMP1A-201ENST00000397901 PRUNE1Q86TP1 453 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms