RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 DENND3A2RUS2 1198 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CCDC188H7C350 402 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PIK3CDO00329 1044 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 EIF3DO15371 548 aaKnown RBP eCLIP5.33□□□□□ -1.56
SSR1-202ENST00000397511 NVLO15381 856 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 E2F6O75461 281 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PIAS1O75925 651 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CREB1P16220 341 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 EIF4BP23588 611 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 ADSSP30520 456 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CAP2P40123 477 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 GJA8P48165 433 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PMS2P54278 862 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 PPATQ06203 517 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RCN2Q14257 317 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 TNIP1Q15025 636 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SNRNP35Q16560 246 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 ZNF394Q53GI3 561 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 FOXB2Q5VYV0 432 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SCARA3Q6AZY7 606 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 STXBP4Q6ZWJ1 553 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SLFN11Q7Z7L1 901 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CROCCP2Q86T23 111 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 CACTIN-AS1Q8N1I8 211 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 AGGF1Q8N302 714 aaeCLIP5.33□□□□□ -1.564e-23■□□□□ 10.7
SSR1-202ENST00000397511 PRELID2Q8N945 189 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 LMO3Q8TAP4 145 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 SPIRE2Q8WWL2 714 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RNF25Q96BH1 459 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 KREMEN1Q96MU8 473 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 RMDN3Q96TC7 470 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 FAM213AQ9BRX8 229 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 DDX23Q9BUQ8 820 aaKnown RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 MIS12Q9H081 205 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 STMN4Q9H169 189 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 ETNK1Q9HBU6 452 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 FAM114A2Q9NRY5 505 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 KIAA1522Q9P206 1035 aaPredicted RBP5.33□□□□□ -1.56
SSR1-202ENST00000397511 RIPK3Q9Y572 518 aa5.33□□□□□ -1.56
SSR1-202ENST00000397511 HNRNPDLO14979 420 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 PEX11AO75192 247 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ATP5HO75947 161 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 OAS1P00973 400 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 P4HBP07237 508 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 CFHP08603 1231 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 CCNB1P14635 433 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 VCAM1P19320 739 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 QARSP47897 775 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 PTDSS1P48651 473 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 ACOT2P49753 483 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 INHBCP55103 352 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 GPC5P78333 572 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 MCL1Q07820 350 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 MTMR2Q13614 643 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 TKFCQ3LXA3 575 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 CCDC92Q53HC0 331 aaPredicted RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 SPDYCQ5MJ68 293 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 C1orf220Q5T0J3 134 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 DENND2CQ68D51 928 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 FOXR2Q6PJQ5 311 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 BTNL9Q6UXG8 535 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ARHGAP27Q6ZUM4 889 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 INTS8Q75QN2 995 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 ENDOVQ8N8Q3 282 aaKnown RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 ANKRD42Q8N9B4 389 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ZNF564Q8TBZ8 553 aaPredicted RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 EPS8L1Q8TE68 723 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 FBXO41Q8TF61 875 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 FAM136AQ96C01 138 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 PPP1R14BQ96C90 147 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ACSF2Q96CM8 615 aaPredicted RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 PGM2Q96G03 612 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 STOML1Q9UBI4 398 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ASIC3Q9UHC3 531 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 PNMA3Q9UL41 463 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 COMMD3-BMI1R4GMX3 469 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 RGS16O15492 202 aaPredicted RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 ENTPD3O75355 529 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 LGR5O75473 907 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 CCNE2O96020 404 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ZNF24P17028 368 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 TNNI1P19237 187 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 YY1P25490 414 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 VHLP40337 213 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 PTENP60484 403 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 USP46P62068 366 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 EN1Q05925 392 aaPredicted RBP5.32□□□□□ -1.56
SSR1-202ENST00000397511 MAP7Q14244 749 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 CCDC6Q16204 474 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 CNPY1Q3B7I2 92 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 SEL1L2Q5TEA6 688 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 ARHGEF16Q5VV41 709 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 KAZNQ674X7 775 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 RASGEF1CQ8N431 466 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 UBL4BQ8N7F7 174 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 SLC17A8Q8NDX2 589 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 SH3TC2Q8TF17 1288 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 UCMAQ8WVF2 138 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 BSNDQ8WZ55 320 aa5.32□□□□□ -1.56
SSR1-202ENST00000397511 HIC2Q96JB3 615 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms