RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 GRK7Q8WTQ7 553 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 LRRN4Q8WUT4 740 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 KLRG1Q96E93 195 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 SEC16BQ96JE7 1060 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 MFSD14AQ96MC6 490 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 XPO6Q96QU8 1125 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 MRPL4Q9BYD3 311 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 COX16Q9P0S2 106 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 LDHAP00338 332 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 GBP2P32456 591 aaPredicted RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 ALDH5A1P51649 535 aaPredicted RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 PSMC1P62191 440 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 Q3C1V9 767 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 RFX6Q8HWS3 928 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 LRRC34Q8IZ02 419 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 TMEM35BQ8NCS4 154 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 CHMP6Q96FZ7 201 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 SNF8Q96H20 258 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 ANKRD36BP1Q96IX9 119 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 MAK16Q9BXY0 300 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 BTBD7Q9P203 1132 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 EXOC1LA0A1B0GW35 172 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 CYP1A2P05177 515 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 CLTAP09496 248 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 FDX1P10109 184 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 RGS7P49802 495 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 PEX5P50542 639 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 BASP1P80723 227 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 ADCY2Q08462 1091 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 NEDD9Q14511 834 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZACNQ401N2 412 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 SAMD3Q8N6K7 520 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 MTMR14Q8NCE2 650 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 CCDC197Q8NCU1 140 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 ATL2Q8NHH9 583 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 RSAD2Q8WXG1 361 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 TRIM11Q96F44 468 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 RUNDC3BQ96NL0 473 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 MPHOSPH6Q99547 160 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 RPF1Q9H9Y2 349 aaKnown RBP11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 HOMER3Q9NSC5 361 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 CISHQ9NSE2 258 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 RNF181Q9P0P0 153 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 BAIAP2L1Q9UHR4 511 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 STK38LQ9Y2H1 464 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 IVNS1ABPQ9Y6Y0 642 aa11.07□□□□□ -0.64
CPSF1P1-201ENST00000397477 LY75O60449 1722 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 PCNTO95613 3336 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 TCP11X1B4DZS4 312 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 RIPK2O43353 540 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 CXCL8P10145 99 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 TGFB2P61812 414 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ATP11AP98196 1134 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 BYSLQ13895 437 aaKnown RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 BBS9Q3SYG4 887 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 TMEM63BQ5T3F8 832 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 EFCAB12Q6NXP0 572 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZDHHC24Q6UX98 284 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ENOSF1Q7L5Y1 443 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZC3H18Q86VM9 953 aaKnown RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 TCP11Q8WWU5 503 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 CPB2Q96IY4 423 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 RBM15Q96T37 977 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 TMEM121Q9BTD3 319 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 SPATC1LQ9H0A9 340 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 PORCNQ9H237 461 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 DDX20Q9UHI6 824 aaKnown RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 SPATA31C2B4DYI2 1134 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 GOLGA8RI6L899 631 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 SHOX2O60902 331 aaPredicted RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ATP4AP20648 1035 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 NAMPTP43490 491 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZNF667Q5HYK9 610 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 OR6B2Q6IFH4 312 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 MFSD7Q6UXD7 560 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 C12orf56Q8IXR9 622 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ZBED8Q8IZ13 594 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ABRAQ8N0Z2 381 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 C4orf33Q8N1A6 199 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 FEZF2Q8TBJ5 459 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 MAIP1Q8WWC4 291 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 KLF6Q99612 283 aaPredicted RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 HERPUD2Q9BSE4 406 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 C17orf75Q9HAS0 396 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ALG13Q9NP73 1137 aaKnown RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 PARVAQ9NVD7 372 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 AFG3L2Q9Y4W6 797 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 TMEM120BA0PK00 339 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 BANF1O75531 89 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 VTNP04004 478 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 GTF2A1P52655 376 aaPredicted RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 GCNT1Q02742 428 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 ACTN3Q08043 901 aaPredicted RBP11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 LAMTOR4Q0VGL1 99 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 PSMD6Q15008 389 aa11.06□□□□□ -0.64
CPSF1P1-201ENST00000397477 E2F5Q15329 346 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms