RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ANO9A1A5B4 782 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 C2CD4DB7Z1M9 353 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 TBC1D4O60343 1298 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 C8AP07357 584 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 SYKP43405 635 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 GUCY2FP51841 1108 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 NDUFA8P51970 172 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 SNRPFP62306 86 aaKnown RBP15.76■□□□□ 0.11
SEC13-208ENST00000397109 FAM160A1Q05DH4 1040 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 CUL4BQ13620 913 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 CTXN3Q4LDR2 81 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 C9orf57Q5W0N0 161 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 RSPO2Q6UXX9 243 aaPredicted RBP15.76■□□□□ 0.11
SEC13-208ENST00000397109 DSTYKQ6XUX3 929 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 ZNF461Q8TAF7 563 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 CACTINQ8WUQ7 758 aaKnown RBP15.76■□□□□ 0.11
SEC13-208ENST00000397109 ZNF707Q96C28 371 aaPredicted RBP15.76■□□□□ 0.11
SEC13-208ENST00000397109 SAAL1Q96ER3 474 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 CBWD1Q9BRT8 395 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
SEC13-208ENST00000397109 C2orf16Q68DN1 1984 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 PIRO00625 290 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 XYLBO75191 536 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 POU2F2P09086 479 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 TYMPP19971 482 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 SP100P23497 879 aaPredicted RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 CASP1P29466 404 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 ELF1P32519 619 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 LILRA4P59901 499 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 YWHAHQ04917 246 aaPredicted RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 SNW1Q13573 536 aaKnown RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 TPGS2Q68CL5 300 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 USP37Q86T82 979 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 FMR1NBQ8N0W7 255 aaPredicted RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 GPD1LQ8N335 351 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 GLIS3Q8NEA6 775 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 EDAQ92838 391 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 PCIF1Q9H4Z3 704 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 DPP3Q9NY33 737 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 RBAKQ9NYW8 714 aaPredicted RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 CGNQ9P2M7 1197 aaKnown RBP15.75■□□□□ 0.11
SEC13-208ENST00000397109 FBXL5Q9UKA1 691 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 MAFFQ9ULX9 164 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 CLUHO75153 1309 aa15.75■□□□□ 0.11
SEC13-208ENST00000397109 ZNF233A6NK53 670 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 ABLIM3O94929 683 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 OAZ2O95190 189 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 ODC1P11926 461 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 ROR1Q01973 937 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 PSMD2Q13200 908 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 SURF1Q15526 300 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 HS2ST1Q7LGA3 356 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 EFCAB13Q8IY85 973 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 GRAMD1CQ8IYS0 662 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 SLC7A14Q8TBB6 771 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 SCFD1Q8WVM8 642 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 EXOC1Q9NV70 894 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 DENND4AQ7Z401 1863 aa15.74■□□□□ 0.11
SEC13-208ENST00000397109 GOLGA8IPA6NC78 632 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 GOLGA8JA6NMD2 632 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 ZNF202O95125 648 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 ATF2P15336 505 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 HOXD13P35453 343 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 TAF6P49848 677 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 ZXDAP98168 799 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 TFAMQ00059 246 aaKnown RBP15.73■□□□□ 0.11
SEC13-208ENST00000397109 PTPN21Q16825 1174 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 BMT2Q1RMZ1 405 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 TMEM130Q8N3G9 435 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 FEZF2Q8TBJ5 459 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 NOC3LQ8WTT2 800 aaKnown RBP15.73■□□□□ 0.11
SEC13-208ENST00000397109 CCDC47Q96A33 483 aaKnown RBP15.73■□□□□ 0.11
SEC13-208ENST00000397109 CCDC34Q96HJ3 373 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 SENP8Q96LD8 212 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 TIGD1Q96MW7 591 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 LRFN3Q9BTN0 628 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 SLC39A2Q9NP94 309 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 HSPBP1Q9NZL4 362 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 DSEQ9UL01 958 aa15.73■□□□□ 0.11
SEC13-208ENST00000397109 WDR27A2RRH5 827 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 OR6C75A6NL08 312 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 PRR33A8MZF0 331 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 PPEF2O14830 753 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 KLRC4O43908 158 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 PNPLA4P41247 253 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 ARPP19P56211 112 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 GAS2L3Q86XJ1 694 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 NELFCDQ8IXH7 590 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 ZSWIM2Q8NEG5 633 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 GOLGA5Q8TBA6 731 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 ZNF560Q96MR9 790 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 C11orf16Q9NQ32 467 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 AGPAT3Q9NRZ7 376 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.72■□□□□ 0.11
SEC13-208ENST00000397109 LIMD1Q9UGP4 676 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 AFF4Q9UHB7 1163 aaKnown RBP15.72■□□□□ 0.11
SEC13-208ENST00000397109 SCN1AP35498 2009 aa15.72■□□□□ 0.11
SEC13-208ENST00000397109 TULP1O00294 542 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms