RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 FKBP9P1Q75LS8 142 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 FBXO16Q8IX29 292 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 RGL4Q8IZJ4 473 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 PLEKHA8Q96JA3 519 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 CRAMP1Q96RY5 1269 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 VPS72Q15906 364 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 SEZ6Q53EL9 994 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 ALOX15P16050 662 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 TBL3Q12788 808 aaKnown RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 MED21Q13503 144 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 USP10Q14694 798 aaKnown RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 IZUMO3Q5VZ72 239 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 ALS2CLQ60I27 953 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 ALKBH2Q6NS38 261 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 APPL1Q9UKG1 709 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 TARSL2A2RTX5 802 aaKnown RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 APRTP07741 180 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 NCAPHQ15003 741 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 ANGPT1Q15389 498 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 CSGALNACT1Q8TDX6 532 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 CCDC3Q9BQI4 270 aa18.29■□□□□ 0.52
MCF2L-208ENST00000397030 RRAGDQ9NQL2 400 aaPredicted RBP18.29■□□□□ 0.52
MCF2L-208ENST00000397030 VCAM1P19320 739 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 SLC11A2P49281 568 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 LAMC2Q13753 1193 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 BEND6Q5SZJ8 279 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-208ENST00000397030 FBXO32Q969P5 355 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 SNF8Q96H20 258 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 ANGPT2O15123 496 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 PROM2Q8N271 834 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 OPTNQ96CV9 577 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 ITGB3P05106 788 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 USP11P51784 963 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 PMS2P54278 862 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 EPHB3P54753 998 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 TAP1Q03518 808 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 EIF2B5Q13144 721 aaKnown RBP18.28■□□□□ 0.52
MCF2L-208ENST00000397030 HIST2H2ACQ16777 129 aaPredicted RBP18.28■□□□□ 0.52
MCF2L-208ENST00000397030 HIST2H2AA3Q6FI13 130 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 TRIM72Q6ZMU5 477 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 ZNF438Q7Z4V0 828 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 ANKRD49Q8WVL7 239 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 MAGED4Q96JG8 741 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 FAM118BQ9BPY3 351 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 PSD3Q9NYI0 1048 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 AVPR1AP37288 418 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 ALDH18A1P54886 795 aaKnown RBP18.28■□□□□ 0.52
MCF2L-208ENST00000397030 CTXN3Q4LDR2 81 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 MAP3K4Q9Y6R4 1608 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 RRN3P2A6NIE6 340 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 ORC4O43929 436 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 MFAP3LO75121 409 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 RHOBTB1O94844 696 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 EYA4O95677 639 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 LRRC14Q15048 493 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 FAM162AQ96A26 154 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 PRR12Q9ULL5 1215 aa18.28■□□□□ 0.52
MCF2L-208ENST00000397030 DGAT1O75907 488 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 GUCY1A2P33402 732 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 MAP2K2P36507 400 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 TRPC1P48995 793 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 SLC15A2Q16348 729 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 SMTNL2Q2TAL5 461 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 SCFD2Q8WU76 684 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 FAM200BP0CF97 657 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 ERFP50548 548 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 NT5C1AQ9BXI3 368 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.52
MCF2L-208ENST00000397030 SCOCQ9UIL1 159 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 MIF4GDA9UHW6 222 aaKnown RBP18.27■□□□□ 0.52
MCF2L-208ENST00000397030 SCP2P22307 547 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 VN1R5Q7Z5H4 357 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 CCDC33Q8N5R6 958 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 ATP6V0D2Q8N8Y2 350 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 AGPAT1Q99943 283 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 KDM6BO15054 1643 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 NCF1BA6NI72 391 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-208ENST00000397030 NCF1CA8MVU1 366 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-208ENST00000397030 ZNF286BP0CG31 522 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 NCF1P14598 390 aaPredicted RBP18.27■□□□□ 0.52
MCF2L-208ENST00000397030 VCLP18206 1134 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 GRIN1Q05586 938 aa18.27■□□□□ 0.52
MCF2L-208ENST00000397030 METTL5Q9NRN9 209 aaKnown RBP18.27■□□□□ 0.52
MCF2L-208ENST00000397030 DYRK3O43781 588 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 DDX39BQ13838 428 aaKnown RBP18.27■□□□□ 0.51
MCF2L-208ENST00000397030 MAP1SQ66K74 1059 aaPredicted RBP18.27■□□□□ 0.51
MCF2L-208ENST00000397030 TAAR1Q96RJ0 339 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 ECT2Q9H8V3 914 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 PPIEQ9UNP9 301 aaKnown RBP18.27■□□□□ 0.51
MCF2L-208ENST00000397030 F5H5T6 163 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 IGKV5-2P06315 115 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 FGFR1P11362 822 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 TNNI3P19429 210 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 SLC9A1P19634 815 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 POLE2P56282 527 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 RABGGTAQ92696 567 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 MOV10L1Q9BXT6 1211 aaKnown RBP18.27■□□□□ 0.51
MCF2L-208ENST00000397030 TASP1Q9H6P5 420 aa18.27■□□□□ 0.51
MCF2L-208ENST00000397030 B3GAT3O94766 335 aa18.26■□□□□ 0.51
MCF2L-208ENST00000397030 GUCA1AP43080 201 aaPredicted RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms