RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 FOXB2Q5VYV0 432 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 PASD1Q8IV76 773 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 GMCL1P1Q8NEA9 526 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 IL31RAQ8NI17 732 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 SCG3Q8WXD2 468 aaKnown RBP25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 ZFP69BQ9UJL9 534 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 USTQ9Y2C2 406 aa25.42■■□□□ 1.66
CSNK1E-203ENST00000396832 A0A1B0GVG6 124 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 ECE2O60344 883 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 MTM1Q13496 603 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 TATDN1Q6P1N9 297 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 HAUS6Q7Z4H7 955 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 DENND1AQ8TEH3 1009 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 FGD4Q96M96 766 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 ZDHHC15Q96MV8 337 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 LBHD1Q9BQE6 289 aaPredicted RBP25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 TLE6Q9H808 572 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 ATP9AO75110 1047 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 DRAXINQ8NBI3 349 aaPredicted RBP25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 MIPEPQ99797 713 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 GORASP1Q9BQQ3 440 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 QTRT2Q9H974 415 aaKnown RBP25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 HOMER2Q9NSB8 354 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 SUGT1Q9Y2Z0 365 aa25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.41■■□□□ 1.66
CSNK1E-203ENST00000396832 MROH7Q68CQ1 1323 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 SKIP12755 728 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 ITGB5P18084 799 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 CDR2Q01850 454 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 RCN1Q15293 331 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 ZFYVE27Q5T4F4 411 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 DSTYKQ6XUX3 929 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 CCDC125Q86Z20 511 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 NRG4Q8WWG1 115 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 ZHX2Q9Y6X8 837 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 UBE4BO95155 1302 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 GAS8O95995 478 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 RALAP11233 206 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 RXRBP28702 533 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 TRABD2AQ86V40 505 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 ACCSQ96QU6 501 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 EPAS1Q99814 870 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 GTF3C4Q9UKN8 822 aa25.4■■□□□ 1.66
CSNK1E-203ENST00000396832 TCP10L2B9ZVM9 353 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 SORBS3O60504 671 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 CD58P19256 250 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 RFX1P22670 979 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 SNRNP35Q16560 246 aaKnown RBP25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 PDK4Q16654 411 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 FAM102BQ5T8I3 360 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 RGS9BPQ6ZS82 235 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 SYDE1Q6ZW31 735 aaPredicted RBP25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 MTDHQ86UE4 582 aaKnown RBP25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 TRAPPC9Q96Q05 1148 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 METTL5Q9NRN9 209 aaKnown RBP25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 CYP1A2P05177 515 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 KAZNQ674X7 775 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 ZC3H18Q86VM9 953 aaKnown RBP25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 SLC9A9Q8IVB4 645 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 STRA6Q9BX79 667 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 PLVAPQ9BX97 442 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 CADM1Q9BY67 442 aaKnown RBP25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 LNPEPQ9UIQ6 1025 aa25.39■■□□□ 1.66
CSNK1E-203ENST00000396832 RBBP6Q7Z6E9 1792 aaKnown RBP25.39■■□□□ 1.65
CSNK1E-203ENST00000396832 POC1B-GALNT4F8VUJ3 575 aa25.39■■□□□ 1.65
CSNK1E-203ENST00000396832 PIK3CDO00329 1044 aa25.39■■□□□ 1.65
CSNK1E-203ENST00000396832 MUTP22033 750 aa25.39■■□□□ 1.65
CSNK1E-203ENST00000396832 NLRP9Q7RTR0 991 aa25.39■■□□□ 1.65
CSNK1E-203ENST00000396832 EZH1Q92800 747 aaPredicted RBP25.39■■□□□ 1.65
CSNK1E-203ENST00000396832 CLRN2A0PK11 232 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 GSTA2P09210 222 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 RPA3P35244 121 aaPredicted RBP25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 CACNA2D1P54289 1103 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 MFAP3P55082 362 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 UGCGQ16739 394 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 SLC45A4Q5BKX6 768 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 GSTA5Q7RTV2 222 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 C4orf33Q8N1A6 199 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 TRABDQ9H4I3 376 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 UBN1Q9NPG3 1134 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 PCMTD2Q9NV79 361 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 KCNA3P22001 575 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 OCRLQ01968 901 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 SPP2Q13103 211 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 CUL3Q13618 768 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 ANKS1BQ7Z6G8 1248 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 GLIS1Q8NBF1 620 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 GRK7Q8WTQ7 553 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 SHC3Q92529 594 aa25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 SCAF8Q9UPN6 1271 aaKnown RBP25.38■■□□□ 1.65
CSNK1E-203ENST00000396832 KRT36O76013 467 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 ADSSP30520 456 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 OTOAQ7RTW8 1153 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 TAB3Q8N5C8 712 aaPredicted RBP25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 KCNH7Q9NS40 1196 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 NUMBLQ9Y6R0 609 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 SPATA31A6Q5VVP1 1343 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 EXOC1LA0A1B0GW35 172 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 PI4K2BG5E9Z4 385 aa25.37■■□□□ 1.65
CSNK1E-203ENST00000396832 PRPF4O43172 522 aaKnown RBP eCLIP25.37■■□□□ 1.653e-16■■■□□ 15.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms