RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 PPME1Q9Y570 386 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 DNAJC25-GNG10A0A024R161 153 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 EBAG9O00559 213 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 OGTO15294 1046 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 GJB1P08034 283 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 FGFR4P22455 802 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 C1QBPQ07021 282 aaKnown RBP17.62■□□□□ 0.41
TRIM39-205ENST00000396551 MCL1Q07820 350 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 PPP1R7Q15435 360 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 FBXO16Q8IX29 292 aaPredicted RBP17.62■□□□□ 0.41
TRIM39-205ENST00000396551 ZBTB10Q96DT7 871 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 DCLK3Q9C098 648 aa17.62■□□□□ 0.41
TRIM39-205ENST00000396551 EVPLQ92817 2033 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 SLC25A27O95847 323 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 NF2P35240 595 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 CORO7P57737 925 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 KLF1Q13351 362 aaPredicted RBP17.61■□□□□ 0.41
TRIM39-205ENST00000396551 C10orf67Q8IYJ2 551 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 TCP11Q8WWU5 503 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 FEZ2Q9UHY8 353 aaPredicted RBP17.61■□□□□ 0.41
TRIM39-205ENST00000396551 AGTPBP1Q9UPW5 1226 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 AP3M2P53677 418 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 ODF2Q5BJF6 829 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 HEMGNQ9BXL5 484 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 MRPL47Q9HD33 250 aaKnown RBP17.61■□□□□ 0.41
TRIM39-205ENST00000396551 AAASQ9NRG9 546 aa17.61■□□□□ 0.41
TRIM39-205ENST00000396551 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRIM39-205ENST00000396551 SPDYE5A6NIY4 337 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 CXCL11O14625 94 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 TLR3O15455 904 aaKnown RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 PSTPIP1O43586 416 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 HOXC6P09630 235 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RALAP11233 206 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 CD58P19256 250 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 IVDP26440 423 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 MXD4Q14582 209 aaPredicted RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 MAPK6Q16659 721 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 CCDC62Q6P9F0 684 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 PLPPR4Q7Z2D5 763 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 NLRP14Q86W24 1093 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 UHMK1Q8TAS1 419 aaKnown RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 MYCBPAPQ8TBZ2 947 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 ZNF473Q8WTR7 871 aaKnown RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 IMPG2Q9BZV3 1241 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RIPK2O43353 540 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 PROZP22891 400 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 MMP8P22894 467 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RPL7AP62424 266 aaKnown RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RHBDF2Q6PJF5 856 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RHPN2Q8IUC4 686 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 ZBTB8OSQ8IWT0 167 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RHOT1Q8IXI2 618 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 KCNH4Q9UQ05 1017 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 USTQ9Y2C2 406 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 SCINQ9Y6U3 715 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 SRRM3A6NNA2 597 aaPredicted RBP17.6■□□□□ 0.41
TRIM39-205ENST00000396551 POTEJP0CG39 1038 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 RARGP13631 454 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 ZNF568Q3ZCX4 644 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 HOOK3Q86VS8 718 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 FEZF2Q8TBJ5 459 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 MAIP1Q8WWC4 291 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 SPATA33Q96N06 139 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 CCT8L2Q96SF2 557 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 PTPRHQ9HD43 1115 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 WHRNQ9P202 907 aa17.6■□□□□ 0.41
TRIM39-205ENST00000396551 B4GALT5O43286 388 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 GAS2O43903 313 aaKnown RBP17.59■□□□□ 0.41
TRIM39-205ENST00000396551 TCF4P15884 667 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 PTK6Q13882 451 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 ZNF394Q53GI3 561 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 CDR2LQ86X02 465 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-205ENST00000396551 CCDC50Q8IVM0 306 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 KATNAL2Q8IYT4 538 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 ANKRD13AQ8IZ07 590 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 CEP120Q8N960 986 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-205ENST00000396551 PPANQ9NQ55 473 aaKnown RBP17.59■□□□□ 0.41
TRIM39-205ENST00000396551 CISHQ9NSE2 258 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 FAM169AQ9Y6X4 670 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 TCRBV5S1A1TA0A578 114 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 ZNF252P-AS1Q0IIN9 211 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 SLMAPQ14BN4 828 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 EEF1DP3Q658K8 133 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 KCNV1Q6PIU1 500 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 MMP19Q99542 508 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 FAM118BQ9BPY3 351 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 NIF3L1Q9GZT8 377 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 E7EVH7 732 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 CHKAP35790 457 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 GJC1P36383 396 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 TRIP13Q15645 432 aaPredicted RBP17.59■□□□□ 0.41
TRIM39-205ENST00000396551 DUOXA2Q1HG44 320 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 THNSL1Q8IYQ7 743 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 PGM2Q96G03 612 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 FAM129AQ9BZQ8 928 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 PDGFCQ9NRA1 345 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 PARVAQ9NVD7 372 aa17.59■□□□□ 0.41
TRIM39-205ENST00000396551 ASIC3Q9UHC3 531 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms