RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TCEANC2Q96MN5 208 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 PDZD7Q9H5P4 517 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 SCUBE2Q9NQ36 999 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 FBXL5Q9UKA1 691 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 URB1O60287 2271 aaKnown RBP15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 KIAA1549LQ6ZVL6 1849 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 TNRC6BQ9UPQ9 1833 aaKnown RBP15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 MYO18BQ8IUG5 2567 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 A0A1W2PRU2 124 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 SLC37A4O43826 429 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 FAM193AP78312 1265 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 SIM1P81133 766 aaPredicted RBP15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 NTRK3Q16288 839 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 UAP1L1Q3KQV9 507 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 CDCA2Q69YH5 1023 aaPredicted RBP15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 OTUD6AQ7L8S5 288 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 ELMOD1Q8N336 334 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 DAGLBQ8NCG7 672 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 UROC1Q96N76 676 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 DNAJC25Q9H1X3 360 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 SLC32A1Q9H598 525 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 GOLGA2P5Q9HBQ8 144 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 FBRSL1Q9HCM7 1045 aaKnown RBP15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 RGL1Q9NZL6 768 aa15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 AFF4Q9UHB7 1163 aaKnown RBP15.09■□□□□ 0.01
VCPKMT-201ENST00000395859 PTPRDP23468 1912 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 KLF18A0A0U1RQI7 1052 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 OTOL1A6NHN0 477 aaPredicted RBP15.08■□□□□ 0
VCPKMT-201ENST00000395859 SYN3O14994 580 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 RNF40O75150 1001 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 C1QL1O75973 258 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 EGFP01133 1207 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 EDN1P05305 212 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 PLCB2Q00722 1185 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 SOX4Q06945 474 aaPredicted RBP15.08■□□□□ 0
VCPKMT-201ENST00000395859 EPHA7Q15375 998 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 ITPRIPL2Q3MIP1 535 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 GAREM2Q75VX8 874 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 SYT13Q7L8C5 426 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 GPIHBP1Q8IV16 184 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 CCDC148Q8NFR7 591 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 EZH1Q92800 747 aaPredicted RBP15.08■□□□□ 0
VCPKMT-201ENST00000395859 FAM83CQ9BQN1 747 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 SLITRK6Q9H5Y7 841 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 VPS54Q9P1Q0 977 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 MYO16Q9Y6X6 1858 aa15.08■□□□□ 0
VCPKMT-201ENST00000395859 PRAMEF12O95522 483 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 APBB3O95704 486 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 AAMPQ13685 434 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 NPY5RQ15761 445 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 GLRA4Q5JXX5 417 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 DHX32Q7L7V1 743 aaKnown RBP15.07■□□□□ 0
VCPKMT-201ENST00000395859 NOSTRINQ8IVI9 506 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 C22orf23Q9BZE7 217 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 ZSWIM4Q9H7M6 989 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 HPS4Q9NQG7 708 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 PRMT7Q9NVM4 692 aaPredicted RBP15.07■□□□□ 0
VCPKMT-201ENST00000395859 SPTA1P02549 2419 aa15.07■□□□□ 0
VCPKMT-201ENST00000395859 DGAT1O75907 488 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 SLITRK3O94933 977 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 LYPLA2O95372 231 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 BCKDHBP21953 392 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 ARPP19P56211 112 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 GRSF1Q12849 480 aaKnown RBP eCLIP15.06■□□□□ 0
VCPKMT-201ENST00000395859 LMAN2Q12907 356 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 XKR4Q5GH76 650 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 RNF19BQ6ZMZ0 732 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 CYP2U1Q7Z449 544 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 HAUS6Q7Z4H7 955 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 C11orf74Q86VG3 221 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 BPIFB1Q8TDL5 484 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 HAS1Q92839 578 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 DYDC2Q96IM9 177 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 FAM20AQ96MK3 541 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 CRISPLD1Q9H336 500 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 DDX25Q9UHL0 483 aaKnown RBP15.06■□□□□ 0
VCPKMT-201ENST00000395859 YIPF1Q9Y548 306 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 ATMQ13315 3056 aa15.06■□□□□ 0
VCPKMT-201ENST00000395859 CCDC196A0A1B0GTZ2 297 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 H7C4K7 107 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 N4BP3O15049 544 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 CTTNQ14247 550 aaKnown RBP15.05■□□□□ -0
VCPKMT-201ENST00000395859 ZNF423Q2M1K9 1284 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 EEF1DP3Q658K8 133 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 ALKAL1Q6UXT8 129 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 CCNI2Q6ZMN8 369 aaPredicted RBP15.05■□□□□ -0
VCPKMT-201ENST00000395859 RASSF3Q86WH2 238 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 HNRNPLLQ8WVV9 542 aaKnown RBP15.05■□□□□ -0
VCPKMT-201ENST00000395859 RNF26Q9BY78 433 aaPredicted RBP15.05■□□□□ -0
VCPKMT-201ENST00000395859 CCDC113Q9H0I3 377 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 SH3GLB2Q9NR46 395 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 TPCN1Q9ULQ1 816 aa15.05■□□□□ -0
VCPKMT-201ENST00000395859 PCDH15Q96QU1 1955 aa15.04■□□□□ -0
VCPKMT-201ENST00000395859 SMIM28A0A1B0GU29 152 aa15.04■□□□□ -0
VCPKMT-201ENST00000395859 DRD1P21728 446 aa15.04■□□□□ -0
VCPKMT-201ENST00000395859 GBP1P32455 592 aa15.04■□□□□ -0
VCPKMT-201ENST00000395859 MCM2P49736 904 aa15.04■□□□□ -0
VCPKMT-201ENST00000395859 DMC1Q14565 340 aa15.04■□□□□ -0
VCPKMT-201ENST00000395859 TRIM61Q5EBN2 209 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms