RNA–Protein interactions for RNA: ENST00000395722.7

PTPN20-206, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,995 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-206ENST00000395722 IKBKEQ14164 716 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 ASTE1Q2TB18 679 aaPredicted RBP16.21■□□□□ 0.19
PTPN20-206ENST00000395722 WDR72Q3MJ13 1102 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 NPAS4Q8IUM7 802 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 RSPH1Q8WYR4 309 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 ZNF560Q96MR9 790 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 CYP3A43Q9HB55 503 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 R3HCC1Q9Y3T6 440 aaKnown RBP16.21■□□□□ 0.19
PTPN20-206ENST00000395722 PCDHB7Q9Y5E2 793 aa16.21■□□□□ 0.19
PTPN20-206ENST00000395722 ABHD14A-ACY1A0A1B0GW23 586 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 PLEKP08567 350 aaPredicted RBP16.2■□□□□ 0.18
PTPN20-206ENST00000395722 CCDC172P0C7W6 258 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 FGFR1P11362 822 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 ZNF132P52740 706 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 MTF1Q14872 753 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 NOMO2Q5JPE7 1267 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 LIMS2Q7Z4I7 341 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 CCDC170Q8IYT3 715 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 RPUSD2Q8IZ73 545 aaKnown RBP16.2■□□□□ 0.18
PTPN20-206ENST00000395722 OLIG1Q8TAK6 271 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 NHEJ1Q9H9Q4 299 aaPredicted RBP16.2■□□□□ 0.18
PTPN20-206ENST00000395722 GDAP2Q9NXN4 497 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 HOXA2O43364 376 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 POMCP01189 267 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 P4HA1P13674 534 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 ANXA13P27216 316 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 CLCN1P35523 988 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 EIF4A3P38919 411 aaKnown RBP16.2■□□□□ 0.18
PTPN20-206ENST00000395722 DSC1Q08554 894 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 TUSC3Q13454 348 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 ZSCAN30Q86W11 494 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 GPIHBP1Q8IV16 184 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 KIAA1524Q8TCG1 905 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 SDCBP2Q9H190 292 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 IL23AQ9NPF7 189 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 KANSL3Q9P2N6 904 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 NXF1Q9UBU9 619 aaKnown RBP16.2■□□□□ 0.18
PTPN20-206ENST00000395722 INPP5FQ9Y2H2 1132 aa16.2■□□□□ 0.18
PTPN20-206ENST00000395722 SPTLC1O15269 473 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
PTPN20-206ENST00000395722 TAF6P49848 677 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 YWHAEP62258 255 aaKnown RBP16.19■□□□□ 0.18
PTPN20-206ENST00000395722 ARID5AQ03989 594 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 PTK2Q05397 1052 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 UPP1Q16831 310 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.19■□□□□ 0.18
PTPN20-206ENST00000395722 URGCPQ8TCY9 931 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 DDX27Q96GQ7 796 aaKnown RBP16.19■□□□□ 0.18
PTPN20-206ENST00000395722 UROC1Q96N76 676 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 CASD1Q96PB1 797 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 HAUS4Q9H6D7 363 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 SMYD3Q9H7B4 428 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 CISHQ9NSE2 258 aa16.19■□□□□ 0.18
PTPN20-206ENST00000395722 PODXLO00592 558 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 CYP26A1O43174 497 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 EFCAB14O75071 495 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 AARSP49588 968 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN20-206ENST00000395722 LILRA4P59901 499 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 INCA1Q0VD86 236 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 SV2CQ496J9 727 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
PTPN20-206ENST00000395722 ABHD8Q96I13 439 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 KCND1Q9NSA2 647 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 TBC1D13Q9NVG8 400 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 NOCTQ9UK39 431 aaKnown RBP16.18■□□□□ 0.18
PTPN20-206ENST00000395722 LRFN2Q9ULH4 789 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 EPN1Q9Y6I3 576 aaPredicted RBP16.18■□□□□ 0.18
PTPN20-206ENST00000395722 COL4A6Q14031 1691 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 KPNA7A9QM74 516 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 B4GALT3O60512 393 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 BAIAP3O94812 1187 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 NDUFA10O95299 355 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 LCA5LO95447 670 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 WEE2P0C1S8 567 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 CLCNKBP51801 687 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 TNNC1P63316 161 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 TDRD12Q587J7 1177 aaKnown RBP16.18■□□□□ 0.18
PTPN20-206ENST00000395722 SCARA5Q6ZMJ2 495 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 TOGARAM2Q6ZUX3 1019 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 TTC39CQ8N584 583 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 PCDHB4Q9Y5E5 795 aa16.18■□□□□ 0.18
PTPN20-206ENST00000395722 EIF3CLB5ME19 914 aaKnown RBP16.17■□□□□ 0.18
PTPN20-206ENST00000395722 CLSTN1O94985 981 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 KRT5P13647 590 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 PAX3P23760 479 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 CYLC1P35663 651 aaPredicted RBP16.17■□□□□ 0.18
PTPN20-206ENST00000395722 USP8P40818 1118 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 PPIGQ13427 754 aaKnown RBP eCLIP16.17■□□□□ 0.18
PTPN20-206ENST00000395722 COL13A1Q5TAT6 717 aaPredicted RBP16.17■□□□□ 0.18
PTPN20-206ENST00000395722 CD300LGQ6UXG3 332 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 C16orf59Q7L2K0 433 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 COLGALT2Q8IYK4 626 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 RBBP8NLQ8NC74 664 aaPredicted RBP16.17■□□□□ 0.18
PTPN20-206ENST00000395722 C3orf58Q8NDZ4 430 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 EPS8L1Q8TE68 723 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 CCDC42Q96M95 316 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 EIF3CQ99613 913 aaKnown RBP16.17■□□□□ 0.18
PTPN20-206ENST00000395722 HTATIP2Q9BUP3 242 aa16.17■□□□□ 0.18
PTPN20-206ENST00000395722 CACNG4Q9UBN1 327 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms