RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 LRRC31Q6UY01 552 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 CYFIP1Q7L576 1253 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 TMEM168Q9H0V1 697 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 TBC1D12O60347 775 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 SMAD1Q15797 465 aaKnown RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 LRRC24Q50LG9 513 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 GALNT17Q6IS24 598 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 MTHFD1LQ6UB35 978 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 DENND6BQ8NEG7 585 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 S100A13Q99584 98 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 CCT8L1PA6NM43 557 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 LAD1O00515 517 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 GJA1P17302 382 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 CASP5P51878 434 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 ME3Q16798 604 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 LRRC17Q8N6Y2 441 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 BHMT2Q9H2M3 363 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 KHDRBS3O75525 346 aaKnown RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 HIST1H2AGP0C0S8 130 aaPredicted RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 HIST1H2ADP20671 130 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 BAG6P46379 1132 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 EDRF1Q3B7T1 1238 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 ZRANB3Q5FWF4 1079 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 TIGD7Q6NT04 549 aaPredicted RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 SIPA1Q96FS4 1042 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 HIST1H2AHQ96KK5 128 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 HIST1H2AJQ99878 128 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 H2AFJQ9BTM1 129 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 CUEDC1Q9NWM3 386 aaPredicted RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 PHGDHO43175 533 aaKnown RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 TPST1O60507 370 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 FAM20BO75063 409 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 AGTP01019 485 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 RESTQ13127 1097 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 ITPRIPL1Q6GPH6 555 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 FASTKD5Q7L8L6 764 aaKnown RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 NECAB2Q7Z6G3 386 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 CENPLQ8N0S6 344 aaPredicted RBP8.35□□□□□ -1.07
TRPS1-203ENST00000395715 C19orf44Q9H6X5 657 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 NRBP2Q9NSY0 501 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 DNAJC12Q9UKB3 198 aa8.35□□□□□ -1.07
TRPS1-203ENST00000395715 FBLN1P23142 703 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 PAX7P23759 505 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 MYH10P35580 1976 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 USP14P54578 494 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 BYSLQ13895 437 aaKnown RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 SULF1Q8IWU6 871 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 SLC25A13Q9UJS0 675 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 TELO2Q9Y4R8 837 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 SNX13Q9Y5W8 968 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CDY2AQ9Y6F7 541 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CDY1Q9Y6F8 540 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 EIF4G3O43432 1585 aaKnown RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ABCC5O15440 1437 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 PLOD2O00469 737 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ATG7O95352 703 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 FAM58BPP0C7Q3 252 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 FNTAP49354 379 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 KCNQ4P56696 695 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ICA1Q05084 483 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CAMK1Q14012 370 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 OTOAQ7RTW8 1153 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CCDC33Q8N5R6 958 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 S100ZQ8WXG8 99 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 DCUN1D1Q96GG9 259 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 THUMPD3Q9BV44 507 aaKnown RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 PCIF1Q9H4Z3 704 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 THAP9Q9H5L6 903 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 SP110Q9HB58 689 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 FARP1Q9Y4F1 1045 aaPredicted RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 MYO10Q9HD67 2058 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ARHGEF33A8MVX0 844 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 KRT36O76013 467 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 DARSP14868 501 aaKnown RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 MYL12AP19105 171 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ATP6V1B2P21281 511 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 POU1F1P28069 291 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CYP2C19P33261 490 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CYP27A1Q02318 531 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ALKBH5Q6P6C2 394 aaKnown RBP8.34□□□□□ -1.07
TRPS1-203ENST00000395715 DPP9Q86TI2 863 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CYP4Z1Q86W10 505 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 VSTM4Q8IW00 320 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 NACC1Q96RE7 527 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 TMEM165Q9HC07 324 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ASAP1Q9ULH1 1129 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CLIC4Q9Y696 253 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 ABCC12Q96J65 1359 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 KRT34O76011 436 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 LSP1P33241 339 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 PSME3P61289 254 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 TUBA1BP68363 451 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 IL5RAQ01344 420 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 CHRNB3Q05901 458 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 TRAF2Q12933 501 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 AKAP4Q5JQC9 854 aa8.34□□□□□ -1.07
TRPS1-203ENST00000395715 TUBA1AQ71U36 451 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms