RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 APBB1IPQ7Z5R6 666 aaPredicted RBP20.68■□□□□ 0.9
LMNB1-202ENST00000395354 ANKRD7Q92527 254 aa20.68■□□□□ 0.9
LMNB1-202ENST00000395354 TATDN2Q93075 761 aa20.68■□□□□ 0.9
LMNB1-202ENST00000395354 PACSIN1Q9BY11 444 aa20.68■□□□□ 0.9
LMNB1-202ENST00000395354 EIF2AQ9BY44 585 aaKnown RBP20.68■□□□□ 0.9
LMNB1-202ENST00000395354 CDT1Q9H211 546 aa20.68■□□□□ 0.9
LMNB1-202ENST00000395354 PCDHGC5Q9Y5F6 944 aa20.68■□□□□ 0.9
LMNB1-202ENST00000395354 ENPP3O14638 875 aa20.67■□□□□ 0.9
LMNB1-202ENST00000395354 NPTXRO95502 500 aa20.67■□□□□ 0.9
LMNB1-202ENST00000395354 DUOXA2Q1HG44 320 aa20.67■□□□□ 0.9
LMNB1-202ENST00000395354 LMBRD2Q68DH5 695 aaPredicted RBP20.67■□□□□ 0.9
LMNB1-202ENST00000395354 C16orf59Q7L2K0 433 aa20.67■□□□□ 0.9
LMNB1-202ENST00000395354 TRIM6Q9C030 488 aaPredicted RBP20.67■□□□□ 0.9
LMNB1-202ENST00000395354 RGS18Q9NS28 235 aa20.67■□□□□ 0.9
LMNB1-202ENST00000395354 PHACTR2O75167 634 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 TMEM253P0C7T8 217 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 TBXAS1P24557 533 aaPredicted RBP20.66■□□□□ 0.9
LMNB1-202ENST00000395354 NAP1L1P55209 391 aaKnown RBP20.66■□□□□ 0.9
LMNB1-202ENST00000395354 SEZ6Q53EL9 994 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 EPS8L1Q8TE68 723 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 TSC1Q92574 1164 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 UBXN4Q92575 508 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 CALR3Q96L12 384 aaKnown RBP20.66■□□□□ 0.9
LMNB1-202ENST00000395354 TRAIPQ9BWF2 469 aa20.66■□□□□ 0.9
LMNB1-202ENST00000395354 TSPYL2Q9H2G4 693 aaPredicted RBP20.66■□□□□ 0.9
LMNB1-202ENST00000395354 NOCTQ9UK39 431 aaKnown RBP20.66■□□□□ 0.9
LMNB1-202ENST00000395354 ENC1O14682 589 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 CLTAP09496 248 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 GZMAP12544 262 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 USP8P40818 1118 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 BPIFB4P59827 614 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 NCOA4Q13772 614 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 DCAF4L1Q3SXM0 396 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 SLC24A5Q71RS6 500 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 OR5B17Q8NGF7 314 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 LINC01599Q8WXQ3 324 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 PI4K2AQ9BTU6 479 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 RPF1Q9H9Y2 349 aaKnown RBP20.65■□□□□ 0.9
LMNB1-202ENST00000395354 FAM105AQ9NUU6 356 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 SNX12Q9UMY4 172 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 PCDHB2Q9Y5E7 798 aa20.65■□□□□ 0.9
LMNB1-202ENST00000395354 A0A0U1RQF3 1178 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 ABHD14A-ACY1A0A1B0GW23 586 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 NCANO14594 1321 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 CYP26A1O43174 497 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 BUB1O43683 1085 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 FGBP02675 491 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 TCP1P17987 556 aaKnown RBP20.64■□□□□ 0.9
LMNB1-202ENST00000395354 EPHB4P54760 987 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 GALCP54803 685 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 LTBP2Q14767 1821 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 ZNF365Q70YC5 407 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 RSRC2Q7L4I2 434 aaKnown RBP20.64■□□□□ 0.9
LMNB1-202ENST00000395354 THNSL1Q8IYQ7 743 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 LRRN4CLQ8ND94 238 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 IMPG2Q9BZV3 1241 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 ISCUQ9H1K1 167 aa20.64■□□□□ 0.9
LMNB1-202ENST00000395354 ANKRD62A6NC57 917 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 C9IYK1 514 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CYP11B1P15538 503 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 RAB27AP51159 221 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 PDE6CP51160 858 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 FAM189BP81408 668 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CKAP4Q07065 602 aaKnown RBP20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CUL2Q13617 745 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 NOP9Q86U38 636 aaKnown RBP20.63■□□□□ 0.89
LMNB1-202ENST00000395354 ZNF677Q86XU0 584 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 SLC20A1Q8WUM9 679 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CTNNBL1Q8WYA6 563 aaPredicted RBP20.63■□□□□ 0.89
LMNB1-202ENST00000395354 GOLGA1Q92805 767 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 RPGRIP1Q96KN7 1286 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CNTN6Q9UQ52 1028 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 ZNF623O75123 536 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 RTN2O75298 545 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 PALMO75781 387 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 TNNC2P02585 160 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 SKIP12755 728 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 IBSPP21815 317 aaPredicted RBP20.63■□□□□ 0.89
LMNB1-202ENST00000395354 OSTNP61366 133 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CDR2Q01850 454 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 TCEAL1Q15170 157 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 SGSM1Q2NKQ1 1148 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 OTOP2Q7RTS6 562 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 CEP120Q8N960 986 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 SMG8Q8ND04 991 aaKnown RBP20.63■□□□□ 0.89
LMNB1-202ENST00000395354 FAXDC2Q96IV6 333 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 ANKRD36BP1Q96IX9 119 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 ASB7Q9H672 318 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.63■□□□□ 0.894e-6■■■■■ 30.1
LMNB1-202ENST00000395354 HYOU1Q9Y4L1 999 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 HES2Q9Y543 173 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 IPPQ9Y573 584 aa20.63■□□□□ 0.89
LMNB1-202ENST00000395354 PDE4DIPQ5VU43 2346 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 CTAGE15A4D2H0 777 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 ASS1P00966 412 aaKnown RBP20.62■□□□□ 0.89
LMNB1-202ENST00000395354 CTAGE8P0CG41 777 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 STAG3L1P0CL83 205 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 CHRNB2P17787 502 aa20.62■□□□□ 0.89
LMNB1-202ENST00000395354 NOP14P78316 857 aaKnown RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms