RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 STX10O60499 249 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 TADA2AO75478 443 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CSPG5O95196 566 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 IL18RAPO95256 599 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 THP07101 528 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 LINC00271P0C7V0 271 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 KRT13P13646 458 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 FECHP22830 423 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 AKAP5P24588 427 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 PON1P27169 355 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CA8P35219 290 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 OR1G1P47890 313 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 AP3M2P53677 418 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 SMC1AQ14683 1233 aaKnown RBP9.14□□□□□ -0.95
HERC4-203ENST00000395185 SYCP1Q15431 976 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 SURF1Q15526 300 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 ZNF568Q3ZCX4 644 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CBWD6Q4V339 395 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CBWD3Q5JTY5 395 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CBWD5Q5RIA9 395 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 FKBP15Q5T1M5 1219 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 KIAA1841Q6NSI8 718 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 ZBTB33Q86T24 672 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 DDX53Q86TM3 631 aaKnown RBP9.14□□□□□ -0.95
HERC4-203ENST00000395185 CDR2LQ86X02 465 aaPredicted RBP9.14□□□□□ -0.95
HERC4-203ENST00000395185 NT5DC4Q86YG4 428 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CD302Q8IX05 232 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 SLC39A11Q8N1S5 342 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 EHBP1Q8NDI1 1231 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 ANP32BQ92688 251 aaKnown RBP9.14□□□□□ -0.95
HERC4-203ENST00000395185 PABPC5Q96DU9 382 aaKnown RBP9.14□□□□□ -0.95
HERC4-203ENST00000395185 IQCDQ96DY2 449 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 ACAP3Q96P50 834 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 POP1Q99575 1024 aaKnown RBP9.14□□□□□ -0.95
HERC4-203ENST00000395185 TCF25Q9BQ70 676 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 NUP58Q9BVL2 599 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 TMEM8AQ9HCN3 771 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 PDE11AQ9HCR9 933 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 SIX2Q9NPC8 291 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CLDND1Q9NY35 253 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 SNTG2Q9NY99 539 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 ANKFY1Q9P2R3 1169 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 CAPN11Q9UMQ6 739 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 HES2Q9Y543 173 aa9.14□□□□□ -0.95
HERC4-203ENST00000395185 TET1Q8NFU7 2136 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 PTPRJQ12913 1337 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 A0A1W2PQJ5 194 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 LACTBL1A8MY62 500 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 NT5C1B-RDH14C9J2C7 533 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 NRP1O14786 923 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 EPHB6O15197 1021 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 N4BP1O75113 896 aaKnown RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 GYPCP04921 128 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 TPM2P07951 284 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 TRIM49P0CI25 452 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 TRIM49CP0CI26 452 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 KCNE1P15382 129 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 KCNA5P22460 613 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 HNRNPH3P31942 346 aaKnown RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 DEKP35659 375 aaKnown RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 MLH1P40692 756 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 GRIK3Q13003 919 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 SEZ6Q53EL9 994 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 HS1BP3Q53T59 392 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 ELMSAN1Q6PJG2 1045 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 USP37Q86T82 979 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 PPFIBP1Q86W92 1011 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 ZNF280BQ86YH2 543 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 CREBRFQ8IUR6 639 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 WDR49Q8IV35 697 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 VPS52Q8N1B4 723 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 MRPL43Q8N983 215 aaKnown RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 SEMA4DQ92854 862 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 IGSF21Q96ID5 467 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 CGRRF1Q99675 332 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 NAA15Q9BXJ9 866 aaKnown RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 EMILIN2Q9BXX0 1053 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 GANQ9H2C0 597 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 NXF3Q9H4D5 531 aaKnown RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 UBE2ZQ9H832 354 aaPredicted RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 SLC38A7Q9NVC3 462 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 RBAKQ9NYW8 714 aaPredicted RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 DERAQ9Y315 318 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.13□□□□□ -0.95
HERC4-203ENST00000395185 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.13□□□□□ -0.95
HERC4-203ENST00000395185 SCN5AQ14524 2016 aa9.13□□□□□ -0.95
HERC4-203ENST00000395185 SZT2Q5T011 3432 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 MEIS3P2A8K0S8 358 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 DPYSL4O14531 572 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 DDHD2O94830 711 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 VNN1O95497 513 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 SLC9A1P19634 815 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 DNAJB1P25685 340 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 PBX3P40426 434 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 GCLMP48507 274 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 NRIP1P48552 1158 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 SLC11A1P49279 550 aa9.12□□□□□ -0.95
HERC4-203ENST00000395185 NDUFV1P49821 464 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms