RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 LRRC63Q05C16 580 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 CLUL1Q15846 466 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 VARS2Q5ST30 1063 aaKnown RBP21.48■■□□□ 1.03
SNCA-203ENST00000394986 C1orf220Q5T0J3 134 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 TTI2Q6NXR4 508 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 RSPO2Q6UXX9 243 aaPredicted RBP21.48■■□□□ 1.03
SNCA-203ENST00000394986 TRAPPC11Q7Z392 1133 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 SENP8Q96LD8 212 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 DUSP9Q99956 384 aaKnown RBP21.48■■□□□ 1.03
SNCA-203ENST00000394986 CLSTN3Q9BQT9 956 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 CLEC1BQ9P126 229 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 VWA8A3KMH1 1905 aa21.48■■□□□ 1.03
SNCA-203ENST00000394986 CETN3O15182 167 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 ADH1AP07327 375 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 TRIM49P0CI25 452 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 TRIM49CP0CI26 452 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 PSMC2P35998 433 aaKnown RBP21.47■■□□□ 1.03
SNCA-203ENST00000394986 BFSP1Q12934 665 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 PAK1Q13153 545 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 PALB2Q86YC2 1186 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 ZC3H3Q8IXZ2 948 aaKnown RBP21.47■■□□□ 1.03
SNCA-203ENST00000394986 SLC22A17Q8WUG5 538 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 BORCS6Q96GS4 357 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 ZNF560Q96MR9 790 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNCA-203ENST00000394986 FNIP2Q9P278 1114 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 MTRRQ9UBK8 725 aa21.47■■□□□ 1.03
SNCA-203ENST00000394986 MAPK13O15264 365 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 NCK2O43639 380 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 CLCN4P51793 760 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 VAMP7P51809 220 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 RBP5P82980 135 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 FKBP3Q00688 224 aaKnown RBP21.46■■□□□ 1.03
SNCA-203ENST00000394986 DPCR1Q3MIW9 517 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 SV2CQ496J9 727 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 ANKS3Q6ZW76 656 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 GPR65Q8IYL9 337 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 TMC2Q8TDI7 906 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 COG5Q9UP83 839 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 KPNA7A9QM74 516 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 CYB561D2O14569 222 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 CST3P01034 146 aaPredicted RBP21.46■■□□□ 1.03
SNCA-203ENST00000394986 SPATA31D3P0C874 917 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 ODC1P11926 461 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 CLDN10P78369 228 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 TDRD10Q5VZ19 366 aaKnown RBP21.46■■□□□ 1.03
SNCA-203ENST00000394986 SPATA31D4Q6ZUB0 917 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 INTS8Q75QN2 995 aaKnown RBP21.46■■□□□ 1.03
SNCA-203ENST00000394986 LRRC52Q8N7C0 313 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 APPL2Q8NEU8 664 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 APOL5Q9BWW9 433 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 MMRN2Q9H8L6 949 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 CDY1Q9Y6F8 540 aa21.46■■□□□ 1.03
SNCA-203ENST00000394986 EPB41P11171 864 aaKnown RBP21.45■■□□□ 1.02
SNCA-203ENST00000394986 KRT13P13646 458 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 OR1D2P34982 312 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 PNPLA4P41247 253 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 CREMQ03060 361 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 BIRC3Q13489 604 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 MRPL58Q14197 206 aaKnown RBP21.45■■□□□ 1.02
SNCA-203ENST00000394986 PDXDC1Q6P996 788 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 RBM43Q6ZSC3 357 aaKnown RBP21.45■■□□□ 1.02
SNCA-203ENST00000394986 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.45■■□□□ 1.02
SNCA-203ENST00000394986 ELMO3Q96BJ8 720 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 MED15Q96RN5 788 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 MKNK1Q9BUB5 465 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 BRWD1Q9NSI6 2320 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 TMEM63CQ9P1W3 806 aa21.45■■□□□ 1.02
SNCA-203ENST00000394986 BICDL2A1A5D9 508 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 FSD2A1L4K1 749 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 SLC16A3O15427 465 aaKnown RBP21.44■■□□□ 1.02
SNCA-203ENST00000394986 TGM5O43548 720 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 GLUD1P00367 558 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 C4BPAP04003 597 aaKnown RBP21.44■■□□□ 1.02
SNCA-203ENST00000394986 KCNQ1P51787 676 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 ARPP19P56211 112 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 NLRP12P59046 1061 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 YWHAHQ04917 246 aaPredicted RBP21.44■■□□□ 1.02
SNCA-203ENST00000394986 CTXN3Q4LDR2 81 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 ZNF280DQ6N043 979 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 TMEM184AQ6ZMB5 413 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 PPFIBP1Q86W92 1011 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 FEZF2Q8TBJ5 459 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 CASP10Q92851 521 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 HPDLQ96IR7 371 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 MSLNLQ96KJ4 702 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 FBXL5Q9UKA1 691 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 R3HCC1Q9Y3T6 440 aaKnown RBP21.44■■□□□ 1.02
SNCA-203ENST00000394986 BACE2Q9Y5Z0 518 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 SCN1AP35498 2009 aa21.44■■□□□ 1.02
SNCA-203ENST00000394986 TBC1D4O60343 1298 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 PHACTR2O75167 634 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 VNN1O95497 513 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 TYMPP19971 482 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 GCLMP48507 274 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 MYL6P60660 151 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 PPP3CAQ08209 521 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 CCDC183Q5T5S1 534 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 WSCD1Q658N2 575 aa21.43■■□□□ 1.02
SNCA-203ENST00000394986 OVOS1Q6IE37 1185 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms