RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 SAMD3Q8N6K7 520 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.29
SMARCD1-202ENST00000394963 PGK1P00558 417 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 VIMP08670 466 aaKnown RBP16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 GTF2A2P52657 109 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 HNRNPH2P55795 449 aaKnown RBP16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 LAMC2Q13753 1193 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 JADE1Q6IE81 842 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 CCDC89Q8N998 374 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 HASPINQ8TF76 798 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 THOC1Q96FV9 657 aaKnown RBP16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 BORCS6Q96GS4 357 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 HPDLQ96IR7 371 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 C9orf72Q96LT7 481 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 C2orf40Q9H1Z8 148 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 A8MXQ7 604 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 M0QZ92 97 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 CLTAP09496 248 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 ATF2P15336 505 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 FLT3P36888 993 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 DMTNQ08495 405 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 C1orf220Q5T0J3 134 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 EMBQ6PCB8 327 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 MPZL3Q6UWV2 235 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 CPLX4Q7Z7G2 160 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 C12orf29Q8N999 325 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 NETO2Q8NC67 525 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 KCTD6Q8NC69 237 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 SHC3Q92529 594 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 MAFBQ9Y5Q3 323 aaPredicted RBP16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 F8VP50 259 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 KIAA0754O94854 1291 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 LCP1P13796 627 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 CA8P35219 290 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 KRT81Q14533 505 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 TMEM132DQ14C87 1099 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 B3GNT9Q6UX72 402 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 PLEKHH3Q7Z736 793 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 JAMLQ86YT9 394 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 FAM71AQ8IYT1 594 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 BRI3BPQ8WY22 251 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 NIF3L1Q9GZT8 377 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 MED4Q9NPJ6 270 aa16.88■□□□□ 0.29
SMARCD1-202ENST00000394963 EDN1P05305 212 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 KRT17Q04695 432 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 GRIK4Q16099 956 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 ZACNQ401N2 412 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 PPP1R21Q6ZMI0 780 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 TMC2Q8TDI7 906 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 PARK7Q99497 189 aaKnown RBP16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 ZSWIM1Q9BR11 485 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 PASKQ96RG2 1323 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 RGS16O15492 202 aaPredicted RBP16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 KRT3P12035 628 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 P4HA1P13674 534 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 GJA5P36382 358 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 BASP1P80723 227 aaKnown RBP16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 ACVR2BQ13705 512 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 CCL14Q16627 93 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 SGSM1Q2NKQ1 1148 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 ZNF354CQ86Y25 554 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 GOLGA2P5Q9HBQ8 144 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 RAB21Q9UL25 225 aa16.87■□□□□ 0.29
SMARCD1-202ENST00000394963 H7C0C1 242 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 CCDC188H7C350 402 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 MAFO75444 373 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 DESP17661 470 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 TBXAS1P24557 533 aaPredicted RBP16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 ATP5OP48047 213 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 DGKDQ16760 1214 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 RSAD2Q8WXG1 361 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 RNF34Q969K3 372 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 CGRRF1Q99675 332 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 GPATCH2LQ9NWQ4 482 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 GTF3C4Q9UKN8 822 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 GPR25O00155 361 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 P4HA2O15460 535 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 WDR93Q6P2C0 686 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 CDT1Q9H211 546 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 SEPT10Q9P0V9 454 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 TJP2Q9UDY2 1190 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 MYPNQ86TC9 1320 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 CHRNB2P17787 502 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 RFX1P22670 979 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 RDXP35241 583 aaKnown RBP16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 MAGOHP61326 146 aaKnown RBP16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 PSMD6Q15008 389 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 LRRC14Q15048 493 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 KCNV1Q6PIU1 500 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 CHST7Q9NS84 486 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 ANAPC5Q9UJX4 755 aa16.86■□□□□ 0.29
SMARCD1-202ENST00000394963 A0A0B4J269 797 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 ATP8B1O43520 1251 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 C1orf228Q6PIY5 440 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 MCOLN2Q8IZK6 566 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 LPIN3Q9BQK8 851 aa16.85■□□□□ 0.29
SMARCD1-202ENST00000394963 HAPLN2Q9GZV7 340 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms