RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 STK38LQ9Y2H1 464 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 CTDP1Q9Y5B0 961 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 H0YIN7 160 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ASMTLO95671 621 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 LDHAP00338 332 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 TROVE2P10155 538 aaKnown RBP eCLIP10.64□□□□□ -0.712e-9■□□□□ 10
UBE2D3-208ENST00000394803 KRT15P19012 456 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ADSSP30520 456 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 CAP2P40123 477 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 CLDN10P78369 228 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 PSMD6Q15008 389 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 TRIP13Q15645 432 aaPredicted RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ZRSR2Q15696 482 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 SEPT7Q16181 437 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 P3H1Q32P28 736 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 CMPK2Q5EBM0 449 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 UBAP2Q5T6F2 1119 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 HHATQ5VTY9 493 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 SLFN12LQ6IEE8 588 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 C15orf39Q6ZRI6 1047 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 MAML1Q92585 1016 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ALKBH8Q96BT7 664 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 TRABDQ9H4I3 376 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 SAYSD1Q9NPB0 183 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 SAR1AQ9NR31 198 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 GINM1Q9NU53 330 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 PKD2L1Q9P0L9 805 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 TBK1Q9UHD2 729 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 PHTF1Q9UMS5 762 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 PCDHAC2Q9Y5I4 1007 aa10.64□□□□□ -0.71
UBE2D3-208ENST00000394803 ABLIM1O14639 778 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 DGAT1O75907 488 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 CALB1P05937 261 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 TSHRP16473 764 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 PIK3CAP42336 1068 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 AP3M2P53677 418 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 WASHC2DQ5SRD0 308 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 PLEKHA7Q6IQ23 1121 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 NLRX1Q86UT6 975 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 ECHDC2Q86YB7 292 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 ABRAQ8N0Z2 381 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 KCNN1Q92952 543 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 PSMC3IPQ9P2W1 217 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 PCDHA10Q9Y5I2 948 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 SCN9AQ15858 1988 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 UMODL1Q5DID0 1318 aa10.63□□□□□ -0.71
UBE2D3-208ENST00000394803 SPDYE2BA6NHP3 402 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 LIASO43766 372 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ZBED4O75132 1171 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 GH1P01241 217 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 SPDYE6P0CI01 402 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 SSR1P43307 286 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 VPS41P49754 854 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 LIG4P49917 911 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 NFX1Q12986 1120 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 DLGAP5Q15398 846 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 KLHL38Q2WGJ6 581 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 LMNTD2Q8IXW0 634 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 FEZF2Q8TBJ5 459 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 GPRASP2Q96D09 838 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 PRMT6Q96LA8 375 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 PAIP2Q9BPZ3 127 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 IMPG2Q9BZV3 1241 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ZNF148Q9UQR1 794 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 BCS1LQ9Y276 419 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 PSME4Q14997 1843 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 TCP10L2B9ZVM9 353 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 TLR3O15455 904 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 EDF1O60869 148 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 DIAPH2O60879 1101 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 LSM8O95777 96 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 CREB1P16220 341 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 TNNI1P19237 187 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 IBSPP21815 317 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 GNA15P30679 374 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 NOMO3P69849 1222 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 MAMLD1Q13495 774 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ZACNQ401N2 412 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ACCSLQ4AC99 568 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 SLC45A4Q5BKX6 768 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ZFYVE27Q5T4F4 411 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 FAM83AQ86UY5 434 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 CPNE8Q86YQ8 564 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ALLCQ8N6M5 410 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 TTC13Q8NBP0 860 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 CLEC4DQ8WXI8 215 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 CPA5Q8WXQ8 436 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 THOC1Q96FV9 657 aaKnown RBP10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 CDHR1Q96JP9 859 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 C9orf72Q96LT7 481 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 RMDN2Q96LZ7 410 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 PCDH9Q9HC56 1237 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 ACP6Q9NPH0 428 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 EFR3BQ9Y2G0 817 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 L3MBTL1Q9Y468 752 aa10.62□□□□□ -0.71
UBE2D3-208ENST00000394803 SMCHD1A6NHR9 2005 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 FAM170AA1A519 330 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 TRAFD1O14545 582 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 ALOX15BO15296 676 aa10.61□□□□□ -0.71
UBE2D3-208ENST00000394803 TM9SF1O15321 606 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms