RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 F8VP50 259 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 EXTL3O43909 919 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 BANF1O75531 89 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 CSDE1O75534 798 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 PROSCO94903 275 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 DSG3P32926 999 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 NFX1Q12986 1120 aaKnown RBP11.17□□□□□ -0.62
ACTN1-203ENST00000394419 SCYL2Q6P3W7 929 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 SLC39A4Q6P5W5 647 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 KCNV2Q8TDN2 545 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 HSPH1Q92598 858 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 ZNF516Q92618 1163 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 KIF9Q9HAQ2 790 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 DCTN4Q9UJW0 460 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
ACTN1-203ENST00000394419 WNK3Q9BYP7 1800 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.621e-11■■■■□ 20.1
ACTN1-203ENST00000394419 FSCN2O14926 492 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CDH16O75309 829 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 STAM2O75886 525 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CNTN2Q02246 1040 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CDO1Q16878 200 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 C6orf89Q6UWU4 347 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 MFSD7Q6UXD7 560 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 ENOSF1Q7L5Y1 443 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CTAGE3PQ8IX95 158 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 FBF1Q8TES7 1133 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CCT6BQ92526 530 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 MYCBPQ99417 103 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-203ENST00000394419 MTMR12Q9C0I1 747 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 LRRC19Q9H756 370 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 ETNK1Q9HBU6 452 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 WHRNQ9P202 907 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 IVNS1ABPQ9Y6Y0 642 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 TJP3O95049 919 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 ZBTB7AO95365 584 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 MAP3K6O95382 1288 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 PSMA2P25787 234 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 SLC1A1P43005 524 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 KCNJ2P63252 427 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 XKR3Q5GH77 459 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 VSIG10LQ86VR7 867 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 ATXN2LQ8WWM7 1075 aaKnown RBP11.16□□□□□ -0.62
ACTN1-203ENST00000394419 PRCCQ92733 491 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CFAP57Q96MR6 1250 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 SERPINB12Q96P63 405 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 SENP7Q9BQF6 1050 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 TIPINQ9BVW5 301 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 ROPN1BQ9BZX4 212 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-203ENST00000394419 ROPN1Q9HAT0 212 aaPredicted RBP11.16□□□□□ -0.62
ACTN1-203ENST00000394419 NOD2Q9HC29 1040 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 PARVAQ9NVD7 372 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 SCINQ9Y6U3 715 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 MROH7Q68CQ1 1323 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
ACTN1-203ENST00000394419 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 TCF4P15884 667 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 GPAT2Q6NUI2 795 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 BBOF1Q8ND07 529 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 OLIG1Q8TAK6 271 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 FEZF2Q8TBJ5 459 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 PYROXD1Q8WU10 500 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 MAK16Q9BXY0 300 aaKnown RBP11.15□□□□□ -0.62
ACTN1-203ENST00000394419 HACL1Q9UJ83 578 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 NUB1Q9Y5A7 615 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 PCNTO95613 3336 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 ARFGEF1Q9Y6D6 1849 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 SNX3O60493 162 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 ATP11AP98196 1134 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 TTLL12Q14166 644 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-203ENST00000394419 NEDD9Q14511 834 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 SMAD1Q15797 465 aaKnown RBP11.15□□□□□ -0.62
ACTN1-203ENST00000394419 FAM83AQ86UY5 434 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 RFX6Q8HWS3 928 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 EMC1Q8N766 993 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 RNF149Q8NC42 400 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.15□□□□□ -0.62
ACTN1-203ENST00000394419 ZNF606Q8WXB4 792 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 STRA6Q9BX79 667 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 KDM4CQ9H3R0 1056 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 TRABDQ9H4I3 376 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
ACTN1-203ENST00000394419 H0Y3Z8 333 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 H0YCG3 227 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 ALDH3A1P30838 453 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 ERFP50548 548 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 WNT7BP56706 349 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 MYL6P60660 151 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 GCNT1Q02742 428 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 MAMLD1Q13495 774 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 STXBP2Q15833 593 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 TRIM68Q6AZZ1 485 aa11.15□□□□□ -0.63
ACTN1-203ENST00000394419 ZC3H18Q86VM9 953 aaKnown RBP11.15□□□□□ -0.63
ACTN1-203ENST00000394419 RHPN2Q8IUC4 686 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms