RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 AARSP49588 968 aaKnown RBP eCLIP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 LILRA4P59901 499 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 NTHL1P78549 312 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 CREMQ03060 361 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 FAM160A1Q05DH4 1040 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 ITIH3Q06033 890 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 RAB33AQ14088 237 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 MRPL58Q14197 206 aaKnown RBP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 SNRNP35Q16560 246 aaKnown RBP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 CTXN3Q4LDR2 81 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 ANKS3Q6ZW76 656 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 HS2ST1Q7LGA3 356 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 GPR149Q86SP6 731 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 C1orf127Q8N9H9 656 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 ST13P5Q8NFI4 369 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 SLC7A14Q8TBB6 771 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 ELMO3Q96BJ8 720 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 SENP8Q96LD8 212 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 PGLYRP2Q96PD5 576 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 TMEM209Q96SK2 561 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 PHF7Q9BWX1 381 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 GZF1Q9H116 711 aaPredicted RBP8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 KCTD10Q9H3F6 313 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 EPHX3Q9H6B9 360 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 CHMP5Q9NZZ3 219 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 MUTYHQ9UIF7 546 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 SIX4Q9UIU6 781 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 FBXL5Q9UKA1 691 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 FBXW11Q9UKB1 542 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 AGAP1Q9UPQ3 857 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 BACE2Q9Y5Z0 518 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 VWA8A3KMH1 1905 aa8.29□□□□□ -1.08
HMGB3P1-201ENST00000393368 PDCD11Q14690 1871 aaKnown RBP8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 FAM86C2PA6NEL3 165 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ZNF233A6NK53 670 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 LOC730098B7Z3J9 87 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 CYB561D2O14569 222 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 HCRTO43612 131 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 EXOC3O60645 756 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ZMYND10O75800 440 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 RHOBTB3O94955 611 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 SEC24AO95486 1093 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 VNN2O95498 520 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 NR3C1P04150 777 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 MYL1P05976 194 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 TMEM191BP0C7N4 346 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ODC1P11926 461 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 CPB1P15086 417 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 TAF6P49848 677 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 YWHAHQ04917 246 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 CYP24A1Q07973 514 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 BFSP1Q12934 665 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 PSMD2Q13200 908 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 PPM1LQ5SGD2 360 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ATAT1Q5SQI0 421 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 LIN9Q5TKA1 542 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 WSCD1Q658N2 575 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ISM2Q6H9L7 571 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ASTLQ6HA08 431 aaPredicted RBP8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 OVOS1Q6IE37 1185 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 SLC8B1Q6J4K2 584 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ZNF280DQ6N043 979 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 PDXDC1Q6P996 788 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 USP37Q86T82 979 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 RNF135Q8IUD6 432 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 GPR65Q8IYL9 337 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 CSGALNACT2Q8N6G5 542 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 XXYLT1Q8NBI6 393 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 APPL2Q8NEU8 664 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 OR10T2Q8NGX3 314 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 CXorf38Q8TB03 319 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 PLEKHO2Q8TD55 490 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 SMG7Q92540 1137 aaKnown RBP8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 EEF2KMTQ96G04 330 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 BORCS6Q96GS4 357 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 RIPOR3Q96MK2 946 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 TSPAN18Q96SJ8 248 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 PIDD1Q9HB75 910 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 INTS13Q9NVM9 706 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 HCFC1R1Q9NWW0 138 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 PRKAG3Q9UGI9 489 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 POLIQ9UNA4 740 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 BDP1A6H8Y1 2624 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 TRIP11Q15643 1979 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 ANK1P16157 1881 aa8.28□□□□□ -1.08
HMGB3P1-201ENST00000393368 CITO14578 2027 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 TTC28Q96AY4 2481 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 TCHHQ07283 1943 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 KPNA7A9QM74 516 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 H7C4K7 107 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 KIAA0391O15091 583 aaKnown RBP8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 N4BP1O75113 896 aaKnown RBP8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 PRPF40AO75400 957 aaKnown RBP8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 SOAT2O75908 522 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 ASGR2P07307 311 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 TNNI1P19237 187 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 MTHFRP42898 656 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 DLG4P78352 724 aa8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 POU5F1Q01860 360 aaKnown RBP8.27□□□□□ -1.09
HMGB3P1-201ENST00000393368 KCNB1Q14721 858 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms