RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TCRBV7S2A1N4TA0A589 114 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 GOLGA6L10A6NI86 522 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 STRNO43815 780 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 GH1P01241 217 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 IRAK1P51617 712 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 TRPC3Q13507 836 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 CEP85LQ5SZL2 805 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 TMEM63BQ5T3F8 832 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 ZDHHC24Q6UX98 284 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 RUFY4Q6ZNE9 571 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 LINC01465Q8N7H1 131 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.22■□□□□ 0.03
MKS1-203ENST00000393120 TRAPPC12Q8WVT3 735 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 NLRP4Q96MN2 994 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 C11orf70Q9BRQ4 267 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 CAPS2Q9BXY5 557 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 TRIM7Q9C029 511 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 XYLT2Q9H1B5 865 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 CISHQ9NSE2 258 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 PARVAQ9NVD7 372 aa15.22■□□□□ 0.03
MKS1-203ENST00000393120 INO80B-WBP1J3KQ70 363 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 TNNC2P02585 160 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 MYZAPP0CAP1 466 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 CYP2C8P10632 490 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 CDH5P33151 784 aaPredicted RBP15.21■□□□□ 0.03
MKS1-203ENST00000393120 EIF3BP55884 814 aaKnown RBP15.21■□□□□ 0.03
MKS1-203ENST00000393120 YWHAEP62258 255 aaKnown RBP15.21■□□□□ 0.03
MKS1-203ENST00000393120 ZNF844Q08AG5 666 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 ZNF568Q3ZCX4 644 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 SCARA3Q6AZY7 606 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 SYDE1Q6ZW31 735 aaPredicted RBP15.21■□□□□ 0.03
MKS1-203ENST00000393120 RHOT1Q8IXI2 618 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 PPTC7Q8NI37 304 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 FEZF2Q8TBJ5 459 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 TRIM31Q9BZY9 425 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 INO80BQ9C086 356 aaPredicted RBP15.21■□□□□ 0.03
MKS1-203ENST00000393120 CWC15Q9P013 229 aaKnown RBP15.21■□□□□ 0.03
MKS1-203ENST00000393120 PCDHGC3Q9UN70 934 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 SNX24Q9Y343 169 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 COL1A2P08123 1366 aa15.21■□□□□ 0.03
MKS1-203ENST00000393120 IQCA1LA6NCM1 817 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 LGALS2P05162 132 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 CALB1P05937 261 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 TMEM191BP0C7N4 346 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 CETPP11597 493 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 INSRRP14616 1297 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 PHKA2P46019 1235 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 CLCN3P51790 818 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 TFAMQ00059 246 aaKnown RBP15.21■□□□□ 0.02
MKS1-203ENST00000393120 MAMDC4Q6UXC1 1216 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 PNMA8AQ86V59 439 aaPredicted RBP15.21■□□□□ 0.02
MKS1-203ENST00000393120 PASD1Q8IV76 773 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 CCDC105Q8IYK2 499 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 KATNAL2Q8IYT4 538 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 UBLCP1Q8WVY7 318 aaPredicted RBP15.21■□□□□ 0.02
MKS1-203ENST00000393120 ANKRD36BP1Q96IX9 119 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 CDT1Q9H211 546 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 IFT122Q9HBG6 1241 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 HOMER3Q9NSC5 361 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 MORF4L1Q9UBU8 362 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 FEZ2Q9UHY8 353 aaPredicted RBP15.21■□□□□ 0.02
MKS1-203ENST00000393120 PASKQ96RG2 1323 aa15.21■□□□□ 0.02
MKS1-203ENST00000393120 B4GALT5O43286 388 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 MCF2P10911 925 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 EIF4BP23588 611 aaKnown RBP15.2■□□□□ 0.02
MKS1-203ENST00000393120 ADORA2AP29274 412 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 RPL21P46778 160 aaKnown RBP15.2■□□□□ 0.02
MKS1-203ENST00000393120 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
MKS1-203ENST00000393120 TNFAIP2Q03169 654 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 KYAT1Q16773 422 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 ZNF699Q32M78 642 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 AGBL2Q5U5Z8 902 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 EEF1DP3Q658K8 133 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 TMEM35BQ8NCS4 154 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 ART4Q93070 314 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 FAM212AQ96EL1 285 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 MS4A4AQ96JQ5 239 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 MINDY3Q9H8M7 445 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 RPF1Q9H9Y2 349 aaKnown RBP15.2■□□□□ 0.02
MKS1-203ENST00000393120 IP6K2Q9UHH9 426 aa15.2■□□□□ 0.02
MKS1-203ENST00000393120 TCRBV5S1A1TA0A578 114 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 TMEM191CA6NGB0 347 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 PDHXO00330 501 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 TLR3O15455 904 aaKnown RBP15.19■□□□□ 0.02
MKS1-203ENST00000393120 PPFIA4O75335 1185 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 ECEL1O95672 775 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 GJB1P08034 283 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 NUDT17P0C025 328 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 ASPAP45381 313 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 PLTPP55058 493 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 TAP1Q03518 808 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 KCTD16Q68DU8 428 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 EXD1Q8NHP7 514 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 FBXO25Q8TCJ0 367 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 KATNBL1Q9H079 304 aa15.19■□□□□ 0.02
MKS1-203ENST00000393120 PABPC3Q9H361 631 aaKnown RBP15.19■□□□□ 0.02
MKS1-203ENST00000393120 MTRF1LQ9UGC7 380 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms