RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 AKAP3O75969 853 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 MOCS2O96007 188 aaPredicted RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 CYP2C8P10632 490 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 SLC12A1Q13621 1099 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 SPATA21Q7Z572 469 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 EXT2Q93063 718 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 MYCBPQ99417 103 aaPredicted RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 ZBTB18Q99592 522 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 FRMD8P1Q9BZ68 369 aaPredicted RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 FAM8A1Q9UBU6 413 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ORC6Q9Y5N6 252 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 SNX2O60749 519 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 HNRNPCL1O60812 293 aaKnown RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 RARBP10826 455 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 CPB1P15086 417 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 PCSK1P29120 753 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 HERVK_113P62684 666 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 EFHC1Q5JVL4 640 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ERO1BQ86YB8 467 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 SH2D3CQ8N5H7 860 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ZNF507Q8TCN5 953 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 PPP1R2P1Q96PQ5 205 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 PNMA5Q96PV4 448 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 SLC4A9Q96Q91 983 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 CBWD1Q9BRT8 395 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 WWP1Q9H0M0 922 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 MROH8Q9H579 483 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 GPRC5CQ9NQ84 441 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 STOML1Q9UBI4 398 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 KIAA1257Q9ULG3 409 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 TFR2Q9UP52 801 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 GAKO14976 1311 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 C3P01024 1663 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 APRTP07741 180 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 CXCL9Q07325 125 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 MRIQ9BWK5 157 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 KCNQ5Q9NR82 932 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ZC3H7BQ9UGR2 993 aaKnown RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 SCAF8Q9UPN6 1271 aaKnown RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 PPME1Q9Y570 386 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 C3orf70A6NLC5 250 aaPredicted RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 DEUP1Q05D60 604 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 BOLA3Q53S33 107 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 FKBP1CQ5VVH2 108 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 RNF219Q5W0B1 726 aaPredicted RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 FRA10AC1Q70Z53 315 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ASAP3Q8TDY4 903 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 C9orf72Q96LT7 481 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 ARHGAP20Q9P2F6 1191 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 XPO7Q9UIA9 1087 aaKnown RBP13.28□□□□□ -0.28
CLTC-202ENST00000393043 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
CLTC-202ENST00000393043 NVLO15381 856 aaKnown RBP13.27□□□□□ -0.28
CLTC-202ENST00000393043 VIL1P09327 827 aaKnown RBP13.27□□□□□ -0.28
CLTC-202ENST00000393043 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.28
CLTC-202ENST00000393043 CHN1P15882 459 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 KIF19Q2TAC6 998 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 SH3RF1Q7Z6J0 888 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 SH3TC2Q8TF17 1288 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 CCT8L2Q96SF2 557 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 ZNF518BQ9C0D4 1074 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 ANKRD65E5RJM6 399 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 F8VZ95 297 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 CLGNO14967 610 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 MEFVO15553 781 aaPredicted RBP13.27□□□□□ -0.28
CLTC-202ENST00000393043 CST8O60676 142 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 ITGA4P13612 1032 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 CYP11B1P15538 503 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 MAGEA4P43358 317 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 MAPK7Q13164 816 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 APOBEC3HQ6NTF7 200 aaKnown RBP13.27□□□□□ -0.28
CLTC-202ENST00000393043 DNERQ8NFT8 737 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 SPATA18Q8TC71 538 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 ACTRT1Q8TDG2 376 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 CGRRF1Q99675 332 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 ETNK1Q9HBU6 452 aa13.27□□□□□ -0.28
CLTC-202ENST00000393043 TCP11X1B4DZS4 312 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 RPS6KA5O75582 802 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 VEPH1Q14D04 833 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 CCNYL1Q8N7R7 359 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 XPO6Q96QU8 1125 aaKnown RBP13.27□□□□□ -0.29
CLTC-202ENST00000393043 CELF4Q9BZC1 486 aaKnown RBP13.27□□□□□ -0.29
CLTC-202ENST00000393043 ZFYVE28Q9HCC9 887 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 UBQLN1Q9UMX0 589 aaKnown RBP13.27□□□□□ -0.29
CLTC-202ENST00000393043 FAM47DPA6NHR8 397 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 NFIBO00712 420 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 RBP3P10745 1247 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 UGP2Q16851 508 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 LONRF1Q17RB8 773 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 GIPC2Q8TF65 315 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 ZNF473Q8WTR7 871 aaKnown RBP13.27□□□□□ -0.29
CLTC-202ENST00000393043 PRMT1Q99873 361 aaKnown RBP13.27□□□□□ -0.29
CLTC-202ENST00000393043 DDX50Q9BQ39 737 aaKnown RBP13.27□□□□□ -0.29
CLTC-202ENST00000393043 LACRTQ9GZZ8 138 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 GOLPH3Q9H4A6 298 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 NDE1Q9NXR1 346 aa13.27□□□□□ -0.29
CLTC-202ENST00000393043 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms