RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 EXOC3L4Q17RC7 722 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 ANKRD20A2Q5SQ80 823 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 ZBTB41Q5SVQ8 909 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 ANKRD20A1Q5TYW2 823 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 ANKRD20A3Q5VUR7 823 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 SEC16BQ96JE7 1060 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 GANQ9H2C0 597 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 MINDY3Q9H8M7 445 aa20.22■□□□□ 0.83
CCDC50-202ENST00000392456 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 LIG4P49917 911 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 VAMP7P51809 220 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 STRN3Q13033 797 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 ZNF268Q14587 947 aaPredicted RBP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 MAATS1Q7Z4T9 603 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 CCDC127Q96BQ5 260 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 ANKRD27Q96NW4 1050 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 SIX2Q9NPC8 291 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 SETD4Q9NVD3 440 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 GCNT4Q9P109 453 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 PPME1Q9Y570 386 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 C5orf60A6NFR6 353 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 F8VZ95 297 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 MSCO60682 206 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 IQCF3P0C7M6 154 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 GCLMP48507 274 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 APLP1P51693 650 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 WNT7BP56706 349 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 SNRPFP62306 86 aaKnown RBP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 MRPS35P82673 323 aaKnown RBP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 PRPF4BQ13523 1007 aaKnown RBP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 MEA1Q16626 185 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 SEZ6Q53EL9 994 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 ZNF484Q5JVG2 852 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 ANO7Q6IWH7 933 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 CCDC63Q8NA47 563 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 NAF1Q96HR8 494 aaKnown RBP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 BZW2Q9Y6E2 419 aaKnown RBP20.21■□□□□ 0.83
CCDC50-202ENST00000392456 MGAMO43451 1857 aa20.21■□□□□ 0.83
CCDC50-202ENST00000392456 EIF4E1BA6NMX2 242 aaKnown RBP20.2■□□□□ 0.82
CCDC50-202ENST00000392456 CLTAP09496 248 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 CCND1P24385 295 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 HIC1Q14526 733 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 QPCTQ16769 361 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 CYP26C1Q6V0L0 522 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 INTS8Q75QN2 995 aaKnown RBP20.2■□□□□ 0.82
CCDC50-202ENST00000392456 LINC01465Q8N7H1 131 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 FBXL18Q96ME1 805 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 CCDC113Q9H0I3 377 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 TOPORSQ9NS56 1045 aaPredicted RBP20.2■□□□□ 0.82
CCDC50-202ENST00000392456 RNF186Q9NXI6 227 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 VTNP04004 478 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 ACOT2P49753 483 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 MXD4Q14582 209 aaPredicted RBP20.2■□□□□ 0.82
CCDC50-202ENST00000392456 TMTC1Q8IUR5 882 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 FAM81BQ96LP2 452 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 ANKFY1Q9P2R3 1169 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 TMCO1Q9UM00 188 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 PLAGL2Q9UPG8 496 aa20.2■□□□□ 0.82
CCDC50-202ENST00000392456 GMNCA6NCL1 334 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 MYADML2A6NDP7 307 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 H0YCG3 227 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 NLRP11P59045 1033 aaKnown RBP20.19■□□□□ 0.82
CCDC50-202ENST00000392456 GRIK4Q16099 956 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 KLHDC7AQ5VTJ3 777 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 CCDC80Q76M96 950 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 CACNA2D4Q7Z3S7 1137 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 ZIM3Q96PE6 472 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 SYT15Q9BQS2 421 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 KRT13P13646 458 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 POLE2P56282 527 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 BTG3Q14201 252 aaPredicted RBP20.19■□□□□ 0.82
CCDC50-202ENST00000392456 KIAA0753Q2KHM9 967 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 CDR2LQ86X02 465 aaPredicted RBP20.19■□□□□ 0.82
CCDC50-202ENST00000392456 CACNA2D3Q8IZS8 1091 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 ELMO3Q96BJ8 720 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 IFT122Q9HBG6 1241 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 UTP6Q9NYH9 597 aaKnown RBP20.19■□□□□ 0.82
CCDC50-202ENST00000392456 CEP72Q9P209 647 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 TUBGCP4Q9UGJ1 667 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 STYXL1Q9Y6J8 313 aa20.19■□□□□ 0.82
CCDC50-202ENST00000392456 B4GALT5O43286 388 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 GAS2O43903 313 aaKnown RBP20.18■□□□□ 0.82
CCDC50-202ENST00000392456 EVI5O60447 810 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 UCHL3P15374 230 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 GARTP22102 1010 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 SP3Q02447 781 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 TAF11Q15544 211 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 GLE1Q53GS7 698 aaKnown RBP20.18■□□□□ 0.82
CCDC50-202ENST00000392456 PDXDC1Q6P996 788 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 KCNV2Q8TDN2 545 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 PPANQ9NQ55 473 aaKnown RBP20.18■□□□□ 0.82
CCDC50-202ENST00000392456 ARHGAP20Q9P2F6 1191 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 F2P00734 622 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 PIGRP01833 764 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 HARSP12081 509 aaKnown RBP20.18■□□□□ 0.82
CCDC50-202ENST00000392456 ELNP15502 786 aa20.18■□□□□ 0.82
CCDC50-202ENST00000392456 TSNAXIP1Q2TAA8 658 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms