RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 CDR2Q01850 454 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 MTFR1Q15390 333 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 CC2D2BQ6DHV5 1058 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 DSTYKQ6XUX3 929 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 NLRP9Q7RTR0 991 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 LRRC6Q86X45 466 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 STMN2Q93045 179 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 MAGEB18Q96M61 343 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 GTF3C4Q9UKN8 822 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 SLC8A3P57103 927 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 TSNAXIP1Q2TAA8 658 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 KRT39Q6A163 491 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 SCARA5Q6ZMJ2 495 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 SV2AQ7L0J3 742 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 CCDC125Q86Z20 511 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 ANKLE1Q8NAG6 615 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 PRR11Q96HE9 360 aaPredicted RBP15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 KIAA1586Q9HCI6 787 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 C1orf112Q9NSG2 853 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 MRPL11Q9Y3B7 192 aaKnown RBP15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 PIK3R2O00459 728 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 GYG2O15488 501 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 KRT36O76013 467 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 ADSSP30520 456 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 RASSF2P50749 326 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 SIX1Q15475 284 aaPredicted RBP15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 CCDC89Q8N998 374 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.39■□□□□ 0.054e-7■■□□□ 13.5
LRRFIP1-204ENST00000392000 RAB20Q9NX57 234 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 USH1CQ9Y6N9 552 aa15.39■□□□□ 0.05
LRRFIP1-204ENST00000392000 GCLCP48506 637 aaPredicted RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 POLGP54098 1239 aaPredicted RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 RPL7AP62424 266 aaKnown RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 BASP1P80723 227 aaKnown RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 KDSRQ06136 332 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 PPP2R5CQ13362 524 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 MTMR1Q13613 665 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 KHDC1Q4VXA5 237 aaKnown RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 FYB2Q5VWT5 728 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 ANKS1BQ7Z6G8 1248 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 CCDC33Q8N5R6 958 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 FBXL13Q8NEE6 735 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 DNAJC9Q8WXX5 260 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 MXRA8Q9BRK3 442 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 TCHPQ9BT92 498 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 CPSF2Q9P2I0 782 aaKnown RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 HEY2Q9UBP5 337 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 PCSK1NQ9UHG2 260 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 RREB1Q92766 1687 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 ANXA13P27216 316 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 TTC7BQ86TV6 843 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 RHPN2Q8IUC4 686 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 MAGEC3Q8TD91 643 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 RNPEPL1Q9HAU8 725 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 CAPN9O14815 690 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 ATP4AP20648 1035 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 QARSP47897 775 aaKnown RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 TFDP1Q14186 410 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 PALM2Q8IXS6 379 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 CFAP61Q8NHU2 1237 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 RFWD2Q8NHY2 731 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 ZNF483Q8TF39 744 aaPredicted RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 GRK7Q8WTQ7 553 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 CHURC1Q8WUH1 139 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 TEKT4Q8WW24 435 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 NOCTQ9UK39 431 aaKnown RBP15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 GRID1Q9ULK0 1009 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 IKBKGQ9Y6K9 419 aa15.38■□□□□ 0.05
LRRFIP1-204ENST00000392000 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 SBF2Q86WG5 1849 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 P4HBP07237 508 aaKnown RBP15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 CALB2P22676 271 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 KPNB1Q14974 876 aaKnown RBP15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 PRAMEF18Q5VWM3 479 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 GMCL1P1Q8NEA9 526 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 CEP170P1Q96L14 293 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 KMT5AQ9NQR1 393 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.37■□□□□ 0.053e-6■■■■□ 23.1
LRRFIP1-204ENST00000392000 ORC1Q13415 861 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 RIPK1Q13546 671 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 SGSM1Q2NKQ1 1148 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 WDR44Q5JSH3 913 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 STRIP1Q5VSL9 837 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 ACAD10Q6JQN1 1059 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 PYROXD1Q8WU10 500 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 BSNDQ8WZ55 320 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 FAM161BQ96MY7 647 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 WHRNQ9P202 907 aa15.37■□□□□ 0.05
LRRFIP1-204ENST00000392000 SMNDC1O75940 238 aaKnown RBP eCLIP15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 DLGAP5Q15398 846 aa15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 BRDTQ58F21 947 aaPredicted RBP15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 CYP4A22Q5TCH4 519 aa15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 OTOAQ7RTW8 1153 aa15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 MASTLQ96GX5 879 aa15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 ZBTB45Q96K62 511 aaPredicted RBP15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 CFAP57Q96MR6 1250 aa15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 SYT15Q9BQS2 421 aa15.36■□□□□ 0.05
LRRFIP1-204ENST00000392000 MAK16Q9BXY0 300 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms