RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 KIAA1671Q9BY89 1806 aa18.3■□□□□ 0.52
ERCC2-202ENST00000391942 GBF1Q92538 1859 aa18.3■□□□□ 0.52
ERCC2-202ENST00000391942 NOL4O94818 638 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 GALTP07902 379 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 TRIM21P19474 475 aaKnown RBP18.29■□□□□ 0.52
ERCC2-202ENST00000391942 PNPLA4P41247 253 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 BRCC3P46736 316 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 SV2CQ496J9 727 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 SPECC1LQ69YQ0 1117 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 DCLRE1AQ6PJP8 1040 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 CD300LGQ6UXG3 332 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 CHRDL2Q6WN34 429 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 SPC24Q8NBT2 197 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 CPLX3Q8WVH0 158 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 TAF4BQ92750 862 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 KAT5Q92993 513 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 ARID3AQ99856 593 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 TMEM175Q9BSA9 504 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 GANQ9H2C0 597 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 PLCB1Q9NQ66 1216 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 SNX9Q9Y5X1 595 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 FHOD1Q9Y613 1164 aa18.29■□□□□ 0.52
ERCC2-202ENST00000391942 KPNA7A9QM74 516 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 BMP8BP34820 402 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 RAP1GAPP47736 663 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 ALDH7A1P49419 539 aaKnown RBP18.28■□□□□ 0.52
ERCC2-202ENST00000391942 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
ERCC2-202ENST00000391942 TNNC1P63316 161 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 IQCEQ6IPM2 695 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 TMEM173Q86WV6 379 aaPredicted RBP18.28■□□□□ 0.52
ERCC2-202ENST00000391942 COLGALT1Q8NBJ5 622 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 MMS19Q96T76 1030 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 COLEC11Q9BWP8 271 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 NIF3L1Q9GZT8 377 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 NLRC4Q9NPP4 1024 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 MARCH5Q9NX47 278 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 DNAJC12Q9UKB3 198 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 PDE4DIPQ5VU43 2346 aa18.28■□□□□ 0.52
ERCC2-202ENST00000391942 ITIH6Q6UXX5 1313 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 TADA2AO75478 443 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 STAU1O95793 577 aaKnown RBP18.27■□□□□ 0.52
ERCC2-202ENST00000391942 UCHL3P15374 230 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 LAG3P18627 525 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 RAPGEF1Q13905 1077 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 ARHGAP44Q17R89 818 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 TIGD5Q53EQ6 642 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 KCNT2Q6UVM3 1135 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 DSTYKQ6XUX3 929 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 SP7Q8TDD2 431 aaPredicted RBP18.27■□□□□ 0.52
ERCC2-202ENST00000391942 BCL7CQ8WUZ0 217 aaPredicted RBP18.27■□□□□ 0.52
ERCC2-202ENST00000391942 ANP32BQ92688 251 aaKnown RBP18.27■□□□□ 0.52
ERCC2-202ENST00000391942 ZNF558Q96NG5 402 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 SMYD3Q9H7B4 428 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 VRTNQ9H8Y1 702 aa18.27■□□□□ 0.52
ERCC2-202ENST00000391942 CYB561D2O14569 222 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 WEE2P0C1S8 567 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 CDC25BP30305 580 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 PBX2P40425 430 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 ASPAP45381 313 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 CDH8P55286 799 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 CUL2Q13617 745 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 GPIHBP1Q8IV16 184 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 TDHQ8IZJ6 230 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 SENP8Q96LD8 212 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 KREMEN1Q96MU8 473 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 SDCBP2Q9H190 292 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 ADAM28Q9UKQ2 775 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 RNF225M0QZC1 329 aaPredicted RBP18.26■□□□□ 0.51
ERCC2-202ENST00000391942 ARHGEF15O94989 841 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 GYPCP04921 128 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 CA3P07451 260 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 P4HA1P13674 534 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 CD58P19256 250 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 CACNA2D4Q7Z3S7 1137 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 SPRED2Q7Z698 418 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 GDAP2Q9NXN4 497 aa18.26■□□□□ 0.51
ERCC2-202ENST00000391942 YBX2Q9Y2T7 364 aaKnown RBP18.26■□□□□ 0.51
ERCC2-202ENST00000391942 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.26■□□□□ 0.516e-6■□□□□ 9.1
ERCC2-202ENST00000391942 TIMM13Q9Y5L4 95 aaPredicted RBP18.26■□□□□ 0.51
ERCC2-202ENST00000391942 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-202ENST00000391942 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-202ENST00000391942 LINC01553A4QN01 128 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 TMEM189-UBE2V1I3L0A0 370 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 HUS1O60921 280 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 LINC00271P0C7V0 271 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 PNMA6AP0CW24 399 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-202ENST00000391942 CASP14P31944 242 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 MFAP3P55082 362 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 SOWAHAQ2M3V2 549 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.25■□□□□ 0.51
ERCC2-202ENST00000391942 PPFIBP1Q86W92 1011 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 IGSF21Q96ID5 467 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 NUP58Q9BVL2 599 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 NAA15Q9BXJ9 866 aaKnown RBP18.25■□□□□ 0.51
ERCC2-202ENST00000391942 TTYH3Q9C0H2 523 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 AAASQ9NRG9 546 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 CEP72Q9P209 647 aa18.25■□□□□ 0.51
ERCC2-202ENST00000391942 MTUS1Q9ULD2 1270 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms