RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 LPIN2Q92539 896 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 LRIG1Q96JA1 1093 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 DUSP26Q9BV47 211 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 PACSIN1Q9BY11 444 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 LRIT1Q9P2V4 623 aa4.51□□□□□ -1.69
TRAV40-201ENST00000390467 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.51□□□□□ -1.69
TRAV40-201ENST00000390467 SHTN1A0MZ66 631 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 E9PLN8 166 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 SUN1O94901 812 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 ZRANB2O95218 330 aaKnown RBP eCLIP4.5□□□□□ -1.69
TRAV40-201ENST00000390467 MATN4O95460 622 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 MTHFD1P11586 935 aaKnown RBP4.5□□□□□ -1.69
TRAV40-201ENST00000390467 KCNA2P16389 499 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 GATA3P23771 443 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 RAB39AQ14964 217 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 CD300EQ496F6 205 aaPredicted RBP4.5□□□□□ -1.69
TRAV40-201ENST00000390467 SP5Q6BEB4 398 aaPredicted RBP4.5□□□□□ -1.69
TRAV40-201ENST00000390467 IL17RDQ8NFM7 739 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 CAGE1Q8TC20 777 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 NSUN6Q8TEA1 469 aaKnown RBP4.5□□□□□ -1.69
TRAV40-201ENST00000390467 VKORC1Q9BQB6 163 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 KLK15Q9H2R5 256 aa4.5□□□□□ -1.69
TRAV40-201ENST00000390467 TNKSO95271 1327 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 PRAMEF33A0A0G2JMD5 474 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 LRRC14BA6NHZ5 514 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 LRRC3CA6NJW4 275 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 PRAMEF10O60809 474 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 CACNA2D1P54289 1103 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 KRT85P78386 507 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 DSC2Q02487 901 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 UAP1L1Q3KQV9 507 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 RNF187Q5TA31 235 aaPredicted RBP4.49□□□□□ -1.69
TRAV40-201ENST00000390467 KIAA0895LQ68EN5 471 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 VWA1Q6PCB0 445 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 GADL1Q6ZQY3 521 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 TSHZ1Q6ZSZ6 1077 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 TMPRSS9Q7Z410 1059 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 CLNKQ7Z7G1 428 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 ARHGEF25Q86VW2 580 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 ADGRG5Q8IZF4 528 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 PDPRQ8NCN5 879 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 SLC30A5Q8TAD4 765 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 CLPTM1LQ96KA5 538 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 IMPG2Q9BZV3 1241 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 IL17RBQ9NRM6 502 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 SEMA4GQ9NTN9 838 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 DMTF1Q9Y222 760 aa4.49□□□□□ -1.69
TRAV40-201ENST00000390467 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.49□□□□□ -1.69
TRAV40-201ENST00000390467 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 YY2O15391 372 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 PROM1O43490 865 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 PEX1O43933 1283 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 ELFN1P0C7U0 828 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 SRGNP10124 158 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 CD38P28907 300 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 FOLR3P41439 243 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 MAPK10P53779 464 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 ELLP55199 621 aaPredicted RBP4.48□□□□□ -1.69
TRAV40-201ENST00000390467 PTPN21Q16825 1174 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 PEG10Q86TG7 708 aaKnown RBP4.48□□□□□ -1.69
TRAV40-201ENST00000390467 CFAP52Q8N1V2 620 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 SLC17A8Q8NDX2 589 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 MYCBPAPQ8TBZ2 947 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 FBXO41Q8TF61 875 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 TFAP2BQ92481 460 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 VRK1Q99986 396 aaPredicted RBP4.48□□□□□ -1.69
TRAV40-201ENST00000390467 ADARB2Q9NS39 739 aaKnown RBP4.48□□□□□ -1.69
TRAV40-201ENST00000390467 INTS13Q9NVM9 706 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 MRPS18AQ9NVS2 196 aaKnown RBP4.48□□□□□ -1.69
TRAV40-201ENST00000390467 ASB6Q9NWX5 421 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 CALCOCO1Q9P1Z2 691 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 KAT6AQ92794 2004 aa4.48□□□□□ -1.69
TRAV40-201ENST00000390467 CCDC195A0A1B0GUA6 201 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 F2RL2O00254 374 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 PPP3CBP16298 524 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 MALP21145 153 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 ANXA11P50995 505 aaKnown RBP4.47□□□□□ -1.69
TRAV40-201ENST00000390467 PROK1P58294 105 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 RPS7P62081 194 aaKnown RBP4.47□□□□□ -1.69
TRAV40-201ENST00000390467 ZNF844Q08AG5 666 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 SNAPC2Q13487 334 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 KHDC1Q4VXA5 237 aaKnown RBP4.47□□□□□ -1.69
TRAV40-201ENST00000390467 TAPT1Q6NXT6 567 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 PNMA8AQ86V59 439 aaPredicted RBP4.47□□□□□ -1.69
TRAV40-201ENST00000390467 SMAD5Q99717 465 aaKnown RBP4.47□□□□□ -1.69
TRAV40-201ENST00000390467 SPATA5L1Q9BVQ7 753 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 ASPSCR1Q9BZE9 553 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 MRFAP1Q9Y605 127 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 CFAP20Q9Y6A4 193 aaKnown RBP4.47□□□□□ -1.69
TRAV40-201ENST00000390467 CADPSQ9ULU8 1353 aa4.47□□□□□ -1.69
TRAV40-201ENST00000390467 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 VWC2LB2RUY7 222 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 ADM5C9JUS6 153 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 TOR1BO14657 336 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 RBMXL2O75526 392 aaKnown RBP4.46□□□□□ -1.7
TRAV40-201ENST00000390467 C1RP00736 705 aa4.46□□□□□ -1.7
TRAV40-201ENST00000390467 LPOP22079 712 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms